Advanced search

Authors whose works are in public domain in at least one jurisdiction

List of works by Masao Nagasaki

1-47 of 47 results

View this query on the Wikidata Query Service
Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators

scientific article
Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

article
The Tohoku Medical Megabank Project: Design and Mission

scientific article published on 02 July 2016
iJGVD: an integrative Japanese genome variation database based on whole-genome sequencing

scientific article published on November 26, 2015
Transposon mutagenesis identifies genes that transform neural stem cells into glioma-initiating cells

scientific article
A microarray analysis of gnotobiotic mice indicating that microbial exposure during the neonatal period plays an essential role in immune system development

scientific article published on July 23, 2012
TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference

scientific article published on July 2, 2013
Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals

scientific article published on June 29, 2015
Profiling of microRNA in human and mouse ES and iPS cells reveals overlapping but distinct microRNA expression patterns

scientific article
Conditional rod photoreceptor ablation reveals Sall1 as a microglial marker and regulator of microglial morphology in the retina

scientific article published on 26 July 2016
Wnt3a stimulates maturation of impaired neutrophils developed from severe congenital neutropenia patient-derived pluripotent stem cells

scientific article published on February 4, 2013
TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads

scientific article published on December 12, 2014
iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data

scientific article published on December 13, 2013
N-cadherin expression is a potential survival mechanism of gefitinib-resistant lung cancer cells

scientific article published on August 8, 2011
A state space representation of VAR models with sparse learning for dynamic gene networks

scientific article published on January 1, 2010
Somatic alteration and depleted nuclear expression of BAP1 in human esophageal squamous cell carcinoma

scientific article published on August 10, 2015
SUGAR: graphical user interface-based data refiner for high-throughput DNA sequencing

scientific article published on August 8, 2014
Cell Illustrator 4.0: A Computational Platform for Systems Biology

scientific article published on January 1, 2010
A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads

scientific article published on September 3, 2013
Identification of acquired mutations by whole-genome sequencing in GATA-2 deficiency evolving into myelodysplasia and acute leukemia

scientific article published on April 30, 2014
Cell illustrator 4.0: a computational platform for systems biology

scientific article published on January 1, 2011
Ontology-based instance data validation for high-quality curated biological pathways

scientific article published on February 15, 2011
Analysis of Müller glia specific genes and their histone modification using Hes1-promoter driven EGFP expressing mouse

scientific article published on 15 June 2017
A novel meta-analysis approach of cancer transcriptomes reveals prevailing transcriptional networks in cancer cells

scientific article published on January 1, 2010
Comparison of gene expression profiles produced by CAGE, illumina microarray and real time RT-PCR

scientific article published on January 1, 2010
Cohort Profile: Tohoku Medical Megabank Project Birth and Three-Generation Cohort Study (TMM BirThree Cohort Study): rationale, progress and perspective

scientific article published on 01 February 2020
XiP: a computational environment to create, extend and share workflows

scholarly article published in 2013
MIRACH: efficient model checker for quantitative biological pathway models

scientific article published on January 5, 2011
Digenic mutations in ALDH2 and ADH5 impair formaldehyde clearance and cause a multisystem disorder, AMeD syndrome

scientific article published on 18 December 2020
ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs

scientific article published on October 30, 2012
CSO validator: improving manual curation workflow for biological pathways

scientific article published on 08 July 2011
Gene regulatory network clustering for graph layout based on microarray gene expression data

scientific article published on January 1, 2010
Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net

scientific article published on 01 January 2011
Study profile of The Tohoku Medical Megabank Community-Based Cohort Study

scientific article published on 11 January 2020
Practical guide for managing large-scale human genome data in research

scientific article published on 23 October 2020
Regional heritability mapping identifies several novel loci (STAT4, ULK4, and KCNH5) for primary biliary cholangitis in the Japanese population

scientific article published on 09 April 2021
Construction of 1070 Whole-genome Japanese Reference Panel and Bioinformatics

scientific article published on February 1, 2016
Estimating copy numbers of alleles from population-scale high-throughput sequencing data

scientific article published on January 21, 2015
The systems approach to the prespore-specific activation of sigma factor SigF in Bacillus subtilis

scientific article published on March 16, 2010
IRView: a database and viewer for protein interacting regions

scientific article published on May 15, 2012
Mapping of susceptible variants for cold medicine-related Stevens-Johnson syndrome by whole-genome resequencing

scientific article published on 11 February 2021
High Performance Hybrid Functional Petri Net Simulations of Biological Pathway Models on CUDA

scientific article published on November 1, 2011
Collocation-based sparse estimation for constructing dynamic gene networks

scientific article published on January 1, 2010
Constructing biological pathway models with hybrid functional petri nets

scientific article published on 01 January 2011
A multi-ethnic meta-analysis identifies novel genes, including ACSL5, associated with amyotrophic lateral sclerosis

scientific article published on 23 September 2020
Direct reprogramming of human umbilical vein- and peripheral blood-derived endothelial cells into hepatic progenitor cells

scientific article published on 21 October 2020
Antiemetic effects of baclofen in a shrew model of postoperative nausea and vomiting: Whole-transcriptome analysis in the nucleus of the solitary tract

scientific article published on 03 March 2022

Paulina is supported by:

About Paulina

Help