Advanced search

Authors whose works are in public domain in at least one jurisdiction

List of works by Darren A. Natale

1-50 of 57 results

View this query on the Wikidata Query Service
The COG database: an updated version includes eukaryotes

scientific article
UniProt: the Universal Protein knowledgebase

scientific article from 2004
InterPro: the integrative protein signature database

scientific article
The Universal Protein Resource (UniProt)

scientific article
InterPro in 2011: new developments in the family and domain prediction database

scientific article
The InterPro protein families database: the classification resource after 15 years

scientific article
InterPro in 2017-beyond protein family and domain annotations

scientific article
The Universal Protein Resource (UniProt): an expanding universe of protein information

scientific article
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes

scientific article
InterPro in 2019: improving coverage, classification and access to protein sequence annotations

article by Alex Mitchell et al published 6 November 2018 in Nucleic Acids Research
The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens

scientific article
PIRSF: family classification system at the Protein Information Resource

scientific article
The Protein Ontology: a structured representation of protein forms and complexes

scientific article
Congruent evolution of different classes of non-coding DNA in prokaryotic genomes

scientific article
Representative proteomes: a stable, scalable and unbiased proteome set for sequence analysis and functional annotation.

scientific article
Framework for a protein ontology

scientific article
Protein Ontology: a controlled structured network of protein entities

scientific article
Novel sequence feature variant type analysis of the HLA genetic association in systemic sclerosis

scientific article
Quantitative organelle proteomics of MCF-7 breast cancer cells reveals multiple subcellular locations for proteins in cellular functional processes

scientific article
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities

scientific article
Community annotation in biology

scientific article (publication date: 18 February 2010)
InterPro in 2011: new developments in the family and domain prediction database

scientific article published on 19 May 2012
The representation of protein complexes in the Protein Ontology (PRO).

scientific article
Computational identification of strain-, species- and genus-specific proteins

scientific article
OMIT: dynamic, semi-automated ontology development for the microRNA domain

scientific article
OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data

scientific article
Recent advances in biocuration: meeting report from the Fifth International Biocuration Conference

scientific article (publication date: 2012)
GlyGen: Computational and Informatics Resources for Glycoscience

scientific article published on 01 January 2020
GlyGen data model and processing workflow

scientific article published on 23 April 2020
TGF-beta signaling proteins and the Protein Ontology

scientific article
Use of the protein ontology for multi-faceted analysis of biological processes: a case study of the spindle checkpoint

scientific article published on 26 April 2013
The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology

scientific article
Structure-guided rule-based annotation of protein functional sites in UniProt knowledgebase

scientific article
Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.

scientific article
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

scientific article published on 13 October 2021
The development of non-coding RNA ontology

scientific article published on January 2016
Toll-like receptor signaling in vertebrates: testing the integration of protein, complex, and pathway data in the protein ontology framework.

scientific article
The InterPro protein families and domains database: 20 years on

scientific article published on 06 November 2020
Protein-centric data integration for functional analysis of comparative proteomics data

scientific article
A semantic approach for knowledge capture of MIcroRNA-Target gene interactions

article
Computational clustering for viral reference proteomes.

scientific article published on 26 February 2016
Scalable Text Mining Assisted Curation of Post-Translationally Modified Proteoforms in the Protein Ontology

scientific article published on August 2016
A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology

scientific article published on 21 October 2022
Framework for a protein ontology

Perspectives on tracking data reuse across biodata resources

Correction: Toll-Like Receptor Signaling in Vertebrates: Testing the Integration of Protein, Complex, and Pathway Data in the Protein Ontology Framework

scientific article published on 18 June 2015
Protein ontology on the semantic web for knowledge discovery

scientific article published on 12 October 2020
BpForms and BcForms: a toolkit for concretely describing non-canonical polymers and complexes to facilitate global biochemical networks

scientific article published on 18 May 2020
COVID-19 Biomarkers in research: Extension of the OncoMX cancer biomarker data model to capture biomarker data from other diseases

scientific article published on 10 September 2020
Annotation of biologically relevant ligands in UniProtKB using ChEBI

scientific article published on 9 December 2022

Paulina is supported by:

About Paulina

Help