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List of works by Oliver A. Ryder

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Resolution of the early placental mammal radiation using Bayesian phylogenetics

scientific article (publication date: 14 December 2001)
Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification

scientific article
Whole-genome analyses resolve early branches in the tree of life of modern birds

scientific article
The sequence and de novo assembly of the giant panda genome

scientific article
Comparative genomics reveals insights into avian genome evolution and adaptation

scientific article
Insights into hominid evolution from the gorilla genome sequence

scientific article
Great ape genetic diversity and population history

scientific article published on 03 July 2013
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

scientific article
Comparative and demographic analysis of orang-utan genomes

scientific article
Macroevolutionary dynamics and historical biogeography of primate diversification inferred from a species supermatrix

scientific article published in 2012
Comparative analysis of gene-expression patterns in human and African great ape cultured fibroblasts

scientific article
A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies

scientific article
Molecular decay of the tooth gene Enamelin (ENAM) mirrors the loss of enamel in the fossil record of placental mammals

scientific article (publication date: September 2009)
Alu insertion loci and platyrrhine primate phylogeny

scientific article published on 18 January 2005
Induced pluripotent stem cells from highly endangered species

scientific article
Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse

scientific article published on 22 September 2015
Copy number variation analysis in the great apes reveals species-specific patterns of structural variation

scientific article
Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements

scientific article (publication date: 15 December 2009)
A mobile element based phylogeny of Old World monkeys

scientific article published on 3 June 2005
Analysis of complete mitochondrial genome sequences increases phylogenetic resolution of bears (Ursidae), a mammalian family that experienced rapid speciation

scientific article (publication date: 24 October 2007)
Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules

scientific article published on January 2004
A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y

scientific article published on 2 March 2016
Conservation Genomics of Threatened Animal Species

scientific article published on January 3, 2013
The value of avian genomics to the conservation of wildlife

scientific article (publication date: 14 July 2009)
Genome-wide characterization of centromeric satellites from multiple mammalian genomes

scientific article (publication date: 2011)
Using genome-wide measures of coancestry to maintain diversity and fitness in endangered and domestic pig populations

scientific article published on 10 June 2015
A massively parallel sequencing approach uncovers ancient origins and high genetic variability of endangered Przewalski's horses

scientific article (publication date: 2011)
Horse domestication and conservation genetics of Przewalski's horse inferred from sex chromosomal and autosomal sequences

scientific article
On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes

scientific article (publication date: 10 April 2011)
Rewinding the process of mammalian extinction

scientific article
Phylogenetic Utility of Nuclear Introns in Interfamilial Relationships of Caniformia (Order Carnivora)

scientific article published on January 20, 2011
Characterization of Prdm9 in Equids and Sterility in Mules

scientific article published on April 22, 2013
Rewinding extinction in the northern white rhinoceros: Genetically diverse induced pluripotent stem cell bank for genetic rescue

scientific article published on 06 January 2021
Genomic analysis of snub-nosed monkeys (Rhinopithecus) identifies genes and processes related to high-altitude adaptation

scientific article published on 11 July 2016
Sequencing primate genomes: what have we learned?

scientific article published on January 2009
Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

scientific article published on 19 February 2018
Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

scientific article published on 21 June 2019
A comprehensive genomic history of extinct and living elephants

scientific article published on 26 February 2018
Tissue sampling methods and standards for vertebrate genomics

scientific article (publication date: 12 July 2012)
The fishes of Genome 10K.

scientific article
Inference of gorilla demographic and selective history from whole-genome sequence data.

scientific article
Primate TNF promoters reveal markers of phylogeny and evolution of innate immunity

scientific article (publication date: 18 July 2007)
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates

scientific article published on 21 August 2020
Incorporating indels as phylogenetic characters: Impact for interfamilial relationships within Arctoidea (Mammalia: Carnivora)

scientific article published on November 10, 2012
Molecular phylogeny of extant equids and effects of ancestral polymorphism in resolving species-level phylogenies

scientific article published on July 28, 2012
Chromosome painting in Tragulidae facilitates the reconstruction of Ruminantia ancestral karyotype

scientific article published on 29 March 2011
Construction of a California condor BAC library and first-generation chicken-condor comparative physical map as an endangered species conservation genomics resource

scientific article published in August 2006
A prevalent POLG CAG microsatellite length allele in humans and African great apes.

scientific article
A chromosomal inversion unique to the northern white-cheeked gibbon

scientific article
Orangutan Alu quiescence reveals possible source element: support for ancient backseat drivers

scientific article published on April 30, 2012

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