List of works - Philip Butcher

Transcriptional Adaptation of Mycobacterium tuberculosis within Macrophages: Insights into the Phagosomal Environment

scientific journal article

Benzothiazinones kill Mycobacterium tuberculosis by blocking arabinan synthesis

scientific journal article

Cytological and transcript analyses reveal fat and lazy persister-like bacilli in tuberculous sputum

scientific article

Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.

scientific article

Dissection of ESAT-6 system 1 of Mycobacterium tuberculosis and impact on immunogenicity and virulence

scientific article

Microarrays reveal that each of the ten dominant lineages of Staphylococcus aureus has a unique combination of surface-associated and regulatory genes

scientific article published on January 2006

Mycobacterial p(1)-type ATPases mediate resistance to zinc poisoning in human macrophages

scientific article published on September 2011

Probing host pathogen cross-talk by transcriptional profiling of both Mycobacterium tuberculosis and infected human dendritic cells and macrophages

scientific article

Stationary phase gene expression of Mycobacterium tuberculosis following a progressive nutrient depletion: a model for persistent organisms?

scientific article published on January 2004

The influence of reduced oxygen availability on pathogenicity and gene expression in Mycobacterium tuberculosis

scientific article published on January 2004

High prevalence of antibiotic-resistant Mycoplasma genitalium in nongonococcal urethritis: the need for routine testing and the inadequacy of current treatment options.

scientific article

Mycobacterium tuberculosis expresses a novel pH-dependent divalent cation transporter belonging to the Nramp family

scientific journal article

Variation in Salmonella enterica serovar typhi IncHI1 plasmids during the global spread of resistant typhoid fever

scientific article published on 17 November 2008

Design, validation, and application of a seven-strain Staphylococcus aureus PCR product microarray for comparative genomics

scientific article published on November 2005

Mycobacterium tuberculosis expresses two chaperonin-60 homologs.

scientific article

An effective method of RNA extraction from bacteria refractory to disruption, including mycobacteria.

scientific article published on February 1997

The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex

scientific article published on 01 November 1987

Analysis of whole-genome microarray replicates using mixed models.

scientific article published in January 2003

Clinical application of whole-genome sequencing to inform treatment for multidrug-resistant tuberculosis cases

scientific article

Clinical use of whole genome sequencing for Mycobacterium tuberculosis

scientific article

Lipid composition and transcriptional response of Mycobacterium tuberculosis grown under iron-limitation in continuous culture: identification of a novel wax ester

scientific journal article

DNA microarrays for virus detection in cases of central nervous system infection

scientific article published on December 2004

Microarray analysis of whole genome expression of intracellular Mycobacterium tuberculosis

scientific article published on May 2007

Determination of Mycobacterium leprae viability by polymerase chain reaction amplification of 71-kDa heat-shock protein mRNA

scientific article published on 01 September 1993

Evolutionary relationships among strains of Mycobacterium tuberculosis with few copies of IS6110.

scientific article published in April 2003

Inactivation of polyketide synthase and related genes results in the loss of complex lipids in Mycobacterium tuberculosis H37Rv

scientific journal article

Application of the polymerase chain reaction to the diagnosis of human toxoplasmosis

scientific article published on 01 March 1993

Evidence for a role for interleukin-17, Th17 cells and iron homeostasis in protective immunity against tuberculosis in cynomolgus macaques

scientific article

Potassium availability triggers Mycobacterium tuberculosis transition to, and resuscitation from, non-culturable (dormant) states

scientific article

Genome sequencing and characterization of an extensively drug-resistant sequence type 111 serotype O12 hospital outbreak strain of Pseudomonas aeruginosa

scientific article published on 8 February 2014

Contrasting transcriptional responses of a virulent and an attenuated strain of Mycobacterium tuberculosis infecting macrophages

scientific article

RNA profiling in host-pathogen interactions

scientific article

Use of genome level-informed PCR as a new investigational approach for analysis of outbreak-associated Mycobacterium tuberculosis isolates.

scientific article

A polymerase chain reaction to detect a spliced late transcript of human cytomegalovirus in the blood of bone marrow transplant recipients

scientific article published on 01 February 1996

Microarray analysis of defined Mycobacterium tuberculosis populations using RNA amplification strategies.

scientific article

Use of whole-genome sequencing to distinguish relapse from reinfection in a completed tuberculosis clinical trial

scientific article

Accurate detection of Neisseria gonorrhoeae ciprofloxacin susceptibility directly from genital and extragenital clinical samples: towards genotype-guided antimicrobial therapy.

scientific article published on 26 January 2016

The heat shock response of Mycobacterium tuberculosis: linking gene expression, immunology and pathogenesis.

scientific article

Microarrays for Mycobacterium tuberculosis

scientific article published on 01 January 2004

Profiling persistent tubercule bacilli from patient sputa during therapy predicts early drug efficacy

scientific article

Cytokine mRNA expression in Mycobacterium ulcerans-infected human skin and correlation with local inflammatory response.

scientific article

Use of DNA Arrays to Study Transcriptional Responses to Antimycobacterial Compounds

article

Genetic composition of Mycobacterium bovis BCG substrain Sofia

scientific article published in November 2003

Point-of-care antibiotic susceptibility testing for gonorrhoea: improving therapeutic options and sparing the use of cephalosporins

scientific article published on November 1, 2010

cDNA-RNA subtractive hybridization reveals increased expression of mycocerosic acid synthase in intracellular Mycobacterium bovis BCG.

scientific article

Genomic diversity among Beijing and non-Beijing Mycobacterium tuberculosis isolates from Myanmar

scientific article

Association of cytomegalovirus infection with post-transplantation cardiac rejection as studied using the polymerase chain reaction

scientific article published on 01 April 1994

Characterisation of bovine leukocyte Ig-like receptors

scientific article (publication date: 2012)

XDR-TB transmission in London: Case management and contact tracing investigation assisted by early whole genome sequencing.

scientific article published on 13 June 2016

Characterization of the heat shock response in Mycobacterium bovis BCG

scientific article

List of works by Philip Butcher

Transcriptional Adaptation of Mycobacterium tuberculosis within Macrophages: Insights into the Phagosomal Environment

Benzothiazinones kill Mycobacterium tuberculosis by blocking arabinan synthesis

Cytological and transcript analyses reveal fat and lazy persister-like bacilli in tuberculous sputum

Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.

Dissection of ESAT-6 system 1 of Mycobacterium tuberculosis and impact on immunogenicity and virulence

Microarrays reveal that each of the ten dominant lineages of Staphylococcus aureus has a unique combination of surface-associated and regulatory genes

Mycobacterial p(1)-type ATPases mediate resistance to zinc poisoning in human macrophages

Probing host pathogen cross-talk by transcriptional profiling of both Mycobacterium tuberculosis and infected human dendritic cells and macrophages

Stationary phase gene expression of Mycobacterium tuberculosis following a progressive nutrient depletion: a model for persistent organisms?

The influence of reduced oxygen availability on pathogenicity and gene expression in Mycobacterium tuberculosis

High prevalence of antibiotic-resistant Mycoplasma genitalium in nongonococcal urethritis: the need for routine testing and the inadequacy of current treatment options.

Mycobacterium tuberculosis expresses a novel pH-dependent divalent cation transporter belonging to the Nramp family

Variation in Salmonella enterica serovar typhi IncHI1 plasmids during the global spread of resistant typhoid fever

Design, validation, and application of a seven-strain Staphylococcus aureus PCR product microarray for comparative genomics

Mycobacterium tuberculosis expresses two chaperonin-60 homologs.

An effective method of RNA extraction from bacteria refractory to disruption, including mycobacteria.

The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex

Analysis of whole-genome microarray replicates using mixed models.

Clinical application of whole-genome sequencing to inform treatment for multidrug-resistant tuberculosis cases

Clinical use of whole genome sequencing for Mycobacterium tuberculosis

Lipid composition and transcriptional response of Mycobacterium tuberculosis grown under iron-limitation in continuous culture: identification of a novel wax ester

DNA microarrays for virus detection in cases of central nervous system infection

Microarray analysis of whole genome expression of intracellular Mycobacterium tuberculosis

Determination of Mycobacterium leprae viability by polymerase chain reaction amplification of 71-kDa heat-shock protein mRNA

Evolutionary relationships among strains of Mycobacterium tuberculosis with few copies of IS6110.

Inactivation of polyketide synthase and related genes results in the loss of complex lipids in Mycobacterium tuberculosis H37Rv

Application of the polymerase chain reaction to the diagnosis of human toxoplasmosis

Evidence for a role for interleukin-17, Th17 cells and iron homeostasis in protective immunity against tuberculosis in cynomolgus macaques

Potassium availability triggers Mycobacterium tuberculosis transition to, and resuscitation from, non-culturable (dormant) states

Genome sequencing and characterization of an extensively drug-resistant sequence type 111 serotype O12 hospital outbreak strain of Pseudomonas aeruginosa

Contrasting transcriptional responses of a virulent and an attenuated strain of Mycobacterium tuberculosis infecting macrophages

RNA profiling in host-pathogen interactions

Use of genome level-informed PCR as a new investigational approach for analysis of outbreak-associated Mycobacterium tuberculosis isolates.

A polymerase chain reaction to detect a spliced late transcript of human cytomegalovirus in the blood of bone marrow transplant recipients

Microarray analysis of defined Mycobacterium tuberculosis populations using RNA amplification strategies.

Use of whole-genome sequencing to distinguish relapse from reinfection in a completed tuberculosis clinical trial

Accurate detection of Neisseria gonorrhoeae ciprofloxacin susceptibility directly from genital and extragenital clinical samples: towards genotype-guided antimicrobial therapy.

The heat shock response of Mycobacterium tuberculosis: linking gene expression, immunology and pathogenesis.

Microarrays for Mycobacterium tuberculosis

Profiling persistent tubercule bacilli from patient sputa during therapy predicts early drug efficacy

Cytokine mRNA expression in Mycobacterium ulcerans-infected human skin and correlation with local inflammatory response.

Use of DNA Arrays to Study Transcriptional Responses to Antimycobacterial Compounds

Genetic composition of Mycobacterium bovis BCG substrain Sofia

Point-of-care antibiotic susceptibility testing for gonorrhoea: improving therapeutic options and sparing the use of cephalosporins

cDNA-RNA subtractive hybridization reveals increased expression of mycocerosic acid synthase in intracellular Mycobacterium bovis BCG.

Genomic diversity among Beijing and non-Beijing Mycobacterium tuberculosis isolates from Myanmar

Association of cytomegalovirus infection with post-transplantation cardiac rejection as studied using the polymerase chain reaction

Characterisation of bovine leukocyte Ig-like receptors

XDR-TB transmission in London: Case management and contact tracing investigation assisted by early whole genome sequencing.

Characterization of the heat shock response in Mycobacterium bovis BCG