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Authors whose works are in public domain in at least one jurisdiction

List of works by Isaac Kohane

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Public standards and patients' control: how to keep electronic medical records accessible but private

scientific article
Transcriptomic analysis of human lung development

scientific article
Escaping the EHR Trap — The Future of Health IT

scientific article published on June 14, 2012
Next-generation sequencing in the clinic: are we ready?

scientific article
The SMART Platform: early experience enabling substitutable applications for electronic health records

scientific article published on March 17, 2012
Characteristics and predictive value of blood transcriptome signature in males with autism spectrum disorders

scientific article
Optimal deconvolution of transcriptional profiling data using quadratic programming with application to complex clinical blood samples

scientific article (publication date: 2011)
Integration of clinical and genetic data in the i2b2 architecture.

scientific article
Prenatal antidepressant exposure is associated with risk for attention-deficit hyperactivity disorder but not autism spectrum disorder in a large health system.

scientific article published on 26 August 2014
Association between reduced plasma 25-hydroxy vitamin D and increased risk of cancer in patients with inflammatory bowel diseases

scientific article published on 23 October 2013
Improving case definition of Crohn's disease and ulcerative colitis in electronic medical records using natural language processing: a novel informatics approach

scientific article published on June 2013
Associations of autoantibodies, autoimmune risk alleles, and clinical diagnoses from the electronic medical records in rheumatoid arthritis cases and non-rheumatoid arthritis controls

scientific article published on March 2013
Inter-species differences of co-expression of neighboring genes in eukaryotic genomes

scientific article
Technical desiderata for the integration of genomic data into Electronic Health Records

scientific article published on December 27, 2011
Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources

scientific article
Multidimensional results reporting to participants in genomic studies: getting it right

scientific article published in June 2010
Gene expression profiling of Duchenne muscular dystrophy skeletal muscle

scientific article published on 16 April 2003
Postsurgical prescriptions for opioid naive patients and association with overdose and misuse: retrospective cohort study

scientific article published on 17 January 2018
SHRINE: enabling nationally scalable multi-site disease studies

scientific article
A novel approach to investigate tissue-specific trinucleotide repeat instability

scientific article
Predicting survival within the lung cancer histopathological hierarchy using a multi-scale genomic model of development

scientific article published in July 2006
Mechanical stretch is a highly selective regulator of gene expression in human bladder smooth muscle cells

scientific article
Comprehensive dissection of PDGF-PDGFR signaling pathways in PDGFR genetically defined cells

scientific article
Rapid identification of myocardial infarction risk associated with diabetes medications using electronic medical records

scientific article
Building national electronic medical record systems via the World Wide Web

scientific article
Population-Level Evidence for an Autoimmune Etiology of Epilepsy

scientific article published on May 1, 2014
A systematic approach to the reporting of medically relevant findings from whole genome sequencing

scientific article published on December 14, 2014
Prediction of chronic obstructive pulmonary disease (COPD) in asthma patients using electronic medical records

scientific article published on 04 March 2009
A genome-wide screen reveals functional gene clusters in the cancer genome and identifies EphA2 as a mitogen in glioblastoma

scientific article published on 6 November 2006
HD CAG-correlated gene expression changes support a simple dominant gain of function

scientific article published on May 2, 2011
Identification of genes expressed with temporal-spatial restriction to developing cerebellar neuron precursors by a functional genomic approach

scientific article
Defective ribosomal protein gene expression alters transcription, translation, apoptosis, and oncogenic pathways in Diamond-Blackfan anemia

scientific article
Expression profiling reveals altered satellite cell numbers and glycolytic enzyme transcription in nemaline myopathy muscle

scholarly article
Predictors of severe outcomes associated with Clostridium difficile infection in patients with inflammatory bowel disease

scientific article published on February 23, 2012
Unbiased gene expression analysis implicates the huntingtin polyglutamine tract in extra-mitochondrial energy metabolism

scientific article
Psychiatric co-morbidity is associated with increased risk of surgery in Crohn's disease

scientific article published on 7 January 2013
Induction of the plasminogen activator system by mechanical stimulation of human bronchial epithelial cells

scientific article published on 22 June 2006
Regulation of myogenic progenitor proliferation in human fetal skeletal muscle by BMP4 and its antagonist Gremlin

scientific article
TYK2 protein-coding variants protect against rheumatoid arthritis and autoimmunity, with no evidence of major pleiotropic effects on non-autoimmune complex traits

scientific article
Validation of electronic health record phenotyping of bipolar disorder cases and controls

scientific article published on 12 December 2014
Reproducibility of gene expression across generations of Affymetrix microarrays

scientific article
Tissue and process specific microRNA-mRNA co-expression in mammalian development and malignancy

scientific article
Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS): architecture

scientific article
A Glimpse of the Next 100 Years in Medicine

An Electronic Health Records Study of Long-Term Weight Gain Following Antidepressant Use

scientific article published on August 1, 2014
The tell-tale heart: population-based surveillance reveals an association of rofecoxib and celecoxib with myocardial infarction

scientific article
Increased measurement accuracy for sequence-verified microarray probes

scientific article published on 11 August 2004
Colonoscopy Is Associated With a Reduced Risk for Colon Cancer and Mortality in Patients With Inflammatory Bowel Diseases

scientific article published on July 17, 2014
Analysis of gene expression in a developmental context emphasizes distinct biological leitmotifs in human cancers

scientific article published on 8 July 2008
Linking gene expression data with patient survival times using partial least squares

scientific article

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