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List of works by Bjoern H Menze

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The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)

scientific article
A comparison of random forest and its Gini importance with standard chemometric methods for the feature selection and classification of spectral data

scientific article published on 10 July 2009
Spatial decision forests for MS lesion segmentation in multi-channel magnetic resonance images

scientific article published on 8 April 2011
Robust prediction of the MASCOT score for an improved quality assessment in mass spectrometric proteomics

scientific article
Image guided personalization of reaction-diffusion type tumor growth models using modified anisotropic eikonal equations

scientific article published on 14 July 2009
Efficient probabilistic model personalization integrating uncertainty on data and parameters: Application to eikonal-diffusion models in cardiac electrophysiology

scientific article
ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI.

scientific article published on 21 July 2016
Segmentation of image ensembles via latent atlases

scientific article published on 4 June 2010
Detecting stable distributed patterns of brain activation using Gini contrast

scientific article
Automated estimation of tumor probability in prostate magnetic resonance spectroscopic imaging: pattern recognition vs quantification

scientific article published in January 2007
Spatial Decision Forests for MS Lesion Segmentation in Multi-Channel MR Images

scientific article published on January 1, 2010
Estimating kinetic parameter maps from dynamic contrast-enhanced MRI using spatial prior knowledge

scientific article published on 14 April 2009
Mimicking the human expert: pattern recognition for an automated assessment of data quality in MR spectroscopic images

scientific article
Mapping patterns of long-term settlement in Northern Mesopotamia at a large scale

scientific article published on 19 March 2012
Global localization of 3D anatomical structures by pre-filtered Hough forests and discrete optimization

scientific article published on 17 March 2013
Why rankings of biomedical image analysis competitions should be interpreted with care

scientific article published in Nature Communications
Joint 3-D vessel segmentation and centerline extraction using oblique Hough forests with steerable filters

scientific article published on 15 October 2014
Radiotherapy planning for glioblastoma based on a tumor growth model: implications for spatial dose redistribution

scientific article published on 20 January 2014
Radiotherapy planning for glioblastoma based on a tumor growth model: improving target volume delineation

scientific article published on 20 January 2014
Cloud-Based Evaluation of Anatomical Structure Segmentation and Landmark Detection Algorithms: VISCERAL Anatomy Benchmarks

scientific article published on 9 June 2016
Multivariate feature selection and hierarchical classification for infrared spectroscopy: serum-based detection of bovine spongiform encephalopathy

scientific article published on 20 January 2007
Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas.

scientific article published on 17 October 2017
Fully convolutional network ensembles for white matter hyperintensities segmentation in MR images

scholarly article by Hongwei Li et al published December 2018 in NeuroImage
Exploring New Multimodal Quantitative Imaging Indices for the Assessment of Osseous Tumour Burden in Prostate Cancer using (68)Ga-PSMA-PET/CT.

scientific article published on 25 May 2017
Using spatial prior knowledge in the spectral fitting of MRS images

scientific article published on 28 April 2011
Automated Whole-Body Bone Lesion Detection for Multiple Myeloma on 68Ga-Pentixafor PET/CT Imaging Using Deep Learning Methods

scientific article published on 8 January 2018
Automated Cardiac MR Scar Quantification in Hypertrophic Cardiomyopathy Using Deep Convolutional Neural Networks

scholarly article by Ahmed S Fahmy et al published December 2018 in JACC: Cardiovascular Imaging
VISCERAL: Towards Large Data in Medical Imaging — Challenges and Directions

scholarly article by Georg Langs et al published 2013 in Lecture Notes in Computer Science
Panoptic vDISCO imaging reveals neuronal connectivity, remote trauma effects and meningeal vessels in intact transparent mice

Automatic segmentation of abdominal organs and adipose tissue compartments in water-fat MRI: Application to weight-loss in obesity

scientific article
Three-dimensional holographic visualization of high-resolution myocardial scar on HoloLens

scientific article published in PLoS ONE
Machine learning analysis of whole mouse brain vasculature

scientific article published on 11 March 2020
A Generative Probabilistic Model and Discriminative Extensions for Brain Lesion Segmentation--With Application to Tumor and Stroke

scientific article
Automated vs. manual pattern recognition of 3D (1)H MRSI data of patients with prostate cancer

scientific article
Spatio-temporal video segmentation with shape growth or shrinkage constraint

scientific article published on 8 July 2014
An automatic multi-tissue human fetal brain segmentation benchmark using the Fetal Tissue Annotation Dataset

publication published on 06 July 2021
Reconstructing cerebrovascular networks under local physiological constraints by integer programming

scientific article published on 23 April 2015
Author Correction: Why rankings of biomedical image analysis competitions should be interpreted with care

scientific article published in Nature Communications
Local Structure Prediction with Convolutional Neural Networks for Multimodal Brain Tumor Segmentation

scholarly article by Pavel Dvořák & Bjoern H Menze published 2016 in Lecture Notes in Computer Science
Brain extraction from normal and pathological images: A joint PCA/Image-Reconstruction approach

Multimodal medical image analysis: from visualization to disease modeling

scientific article published in February 2011
Segmentation of Skeleton and Organs in Whole-Body CT Images via Iterative Trilateration

scientific article published on 27 June 2017
Creating a Large-Scale Silver Corpus from Multiple Algorithmic Segmentations

Wall shear stress estimation in the aorta: Impact of wall motion, spatiotemporal resolution, and phase noise

scientific article published in April 2018
Fast Anatomical Structure Localization Using Top-Down Image Patch Regression

Tracing cell lineages in videos of lens-free microscopy

scientific article published on 05 June 2018
Hierarchical Multi-Organ Segmentation Without Registration in 3D Abdominal CT Images

Importance of patient DTI's to accurately model glioma growth using the reaction diffusion equation

Computational Simulation of Tumor Hypoxia Based on In Vivo Microvasculature Assessed in a Dorsal Skin Window Chamber

scientific article
W-Net for Whole-Body Bone Lesion Detection on $$^{68}$$ Ga-Pentixafor PET/CT Imaging of Multiple Myeloma Patients

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