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Authors whose works are in public domain in at least one jurisdiction

List of works by Daniel S. Rokhsar

1-50 of 188 results

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

scientific article

Phytozome: a comparative platform for green plant genomics

scientific article (publication date: 2012)

The Chlamydomonas genome reveals the evolution of key animal and plant functions

scientific article

The Sorghum bicolor genome and the diversification of grasses

scientific article

Community structure and metabolism through reconstruction of microbial genomes from the environment

scientific article (publication date: 4 March 2004)

The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

scientific article

Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization

scientific article

The amphioxus genome and the evolution of the chordate karyotype

scientific article

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

scientific article

The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

scientific article

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

scientific article

The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans

scientific article

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

scientific article published in December 2012

The Amphimedon queenslandica genome and the evolution of animal complexity

scientific article

The Trichoplax genome and the nature of placozoans

scientific article

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

scientific article

Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis

scientific article

The genome of the Western clawed frog Xenopus tropicalis

scientific article

Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals

scientific article (publication date: October 2008)

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

scientific article

The dynamic genome of Hydra

scientific article

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

scientific article

A reference genome for common bean and genome-wide analysis of dual domestications

scientific article published on 8 June 2014

The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome

scholarly article

Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

scientific article

Reference genome sequence of the model plant Setaria

scientific article

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

scientific article

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

scientific article

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri

scientific article

Assemblathon 1: a competitive assessment of de novo short read assembly methods

scientific article

The genome portal of the Department of Energy Joint Genome Institute

scientific article published on 22 November 2011

Genome evolution in the allotetraploid frog Xenopus laevis

scientific article

Reverse methanogenesis: testing the hypothesis with environmental genomics

scientific article published in September 2004

Insights into bilaterian evolution from three spiralian genomes

scientific article

The Genome of Naegleria gruberi Illuminates Early Eukaryotic Versatility

scientific article

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

scientific article

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

scientific article

The genome of Eucalyptus grandis

scientific article

Topology of the resonating valence-bond state: Solitons and high- T c superconductivity

scientific article

Chromosome-scale shotgun assembly using an in vitro method for long-range linkage

scientific article published on 4 February 2016

Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication

scientific article (publication date: July 2014)

The DNA sequence and biology of human chromosome 19

scientific article

The Capsella rubella genome and the genomic consequences of rapid mating system evolution

scientific article

Rapid whole-genome mutational profiling using next-generation sequencing technologies

scientific article published on 4 September 2008

The octopus genome and the evolution of cephalopod neural and morphological novelties

scientific article

Genesis and expansion of metazoan transcription factor gene classes

scientific article published on 21 February 2008

Molecular dynamics simulations of unfolding and refolding of a beta-hairpin fragment of protein G

scientific article

Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ).

scientific article

Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution

scientific article

Promoter elements associated with RNA Pol II stalling in the Drosophila embryo

scholarly article