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List of works by Navtej Juty

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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

scientific article (publication date: March 2003)
A community-driven global reconstruction of human metabolism.

scientific article
BioModels: ten-year anniversary

scientific article
Controlled vocabularies and semantics in systems biology

scientific article (publication date: 25 October 2011)
Identifiers.org and MIRIAM Registry: community resources to provide persistent identification

scientific article
Tools and data services registry: a community effort to document bioinformatics resources

scientific article
FAIR Principles: Interpretations and Implementation Considerations

scholarly article
BioModels: Content, Features, Functionality, and Use

scientific article
Designing and encoding models for synthetic biology

scientific article published on April 2009
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

scientific article
Uniform resolution of compact identifiers for biomedical data

scientific article
The Klebsiella pneumoniae cytochrome bd’ terminal oxidase complex and its role in microaerobic nitrogen fixation

scientific article published on August 1, 1997
Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop

scientific article (publication date: 25 December 2010)
MELTING, a flexible platform to predict the melting temperatures of nucleic acids

scientific article
The evolution of standards and data management practices in systems biology

scientific article
The health care and life sciences community profile for dataset descriptions

scientific article (publication date: 2016)
Towards the collaborative curation of the registry underlying Identifiers.org

scientific article (publication date: 2013)
Leveraging European infrastructures to access 1 million human genomes by 2022

scientific article published on 27 August 2019
Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

scientific article published on 9 August 2018
Harmonizing semantic annotations for computational models in biology

scientific article published on 01 March 2019
Controlled annotations for systems biology

scientific article published on January 2013
SPARQL-enabled identifier conversion with Identifiers.org

scientific article
BioHackathon 2015: Semantics of data for life sciences and reproducible research

scientific article published on 24 February 2020
Identifiers.org - Compact Identifier Services in the Cloud

scientific article published on 08 October 2020
The Input Signal Step Function (ISSF), a standard method to encode input signals in SBML models with software support, applied to circadian clock models.

scientific article published in August 2012
Simultaneous modelling of metabolic, genetic and product-interaction networks.

scientific article published on September 2001
The health care and life sciences community profile for dataset descriptions

article published in 2016
Kinetic Simulation Algorithm Ontology

scholarly article
Unique, Persistent, Resolvable: Identifiers as the Foundation of FAIR

Author Correction: Leveraging European infrastructures to access 1 million human genomes by 2022

scientific article published on 01 November 2019
MIRIAM Resources: a robust annotation and cross referencing framework

The FAIR Cookbook - the essential resource for and by FAIR doers

scientific article published on 19 May 2023
Features of a FAIR vocabulary

WorkflowHub: a registry for computational workflows

scientific article published on 21 May 2025
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

scientific article (publication date: 20 March 2017)
FAIR in action - a flexible framework to guide FAIRification

scientific article published on 19 May 2023
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services

scientific article
Uniform Resolution of Compact Identifiers for Biomedical Data

preprint
1. MIRIAM Identifiers and Resources / 2. Existing Identifier Schemes

BH25DE report: On the path to machine-actionable training materials

The health care and life sciences community profile for dataset descriptions

scholarly article
Applying the FAIR Principles to computational workflows

scientific article published on 24 February 2025
Harmonizing semantic annotations for computational models in biology

BioHackEU24 report: Bioschemas for Mortals

“Be sustainable”: EOSC‐Life recommendations for implementation of FAIR principles in life science data handling

scientific article published on 15 November 2023
Identifiers.org/MIRIAM Registry annotation and cross-referencing framework

SBML Level 3 Package Proposal: Annotation

The health care and life sciences community profile for dataset descriptions

Delivering 'Cool URIs' That Do Not Change

Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

article by Dagmar Waltemath et al published 15 March 2014 in Standards in genomic sciences

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