List of works - John Kenneth Baillie

An atlas of active enhancers across human cell types and tissues

scientific article

A promoter-level mammalian expression atlas

scientific article

IFITM3 restricts the morbidity and mortality associated with influenza

scientific article

Somatic retrotransposition alters the genetic landscape of the human brain

scientific article (publication date: 30 October 2011)

Clinical evidence does not support corticosteroid treatment for 2019-nCoV lung injury

scientific article published on 07 February 2020

Microglial brain region-dependent diversity and selective regional sensitivities to aging.

scientific article published on 18 January 2016

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

scientific article

Gateways to the FANTOM5 promoter level mammalian expression atlas

scientific article

The effectiveness of convalescent plasma and hyperimmune immunoglobulin for the treatment of severe acute respiratory infections of viral etiology: a systematic review and exploratory meta-analysis

scientific article

Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma

scientific article published on March 2013

Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages

scientific article

Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: prospective observational cohort study

scientific article published on 22 May 2020

Middle East Respiratory Syndrome.

scientific article

An expression atlas of human primary cells: inference of gene function from coexpression networks

scientific article

A gene expression atlas of the domestic pig

scientific article

Antiviral combinations for severe influenza

scientific article

The role of host genetics in susceptibility to influenza: a systematic review

scientific article

Meta-analysis of lineage-specific gene expression signatures in mouse leukocyte populations

article

Functional clustering and lineage markers: insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations

scientific article published on 06 March 2010

Expression of mesenchyme-specific gene signatures by follicular dendritic cells: insights from the meta-analysis of microarray data from multiple mouse cell populations

scientific article

Heteroresistance at the single-cell level: adapting to antibiotic stress through a population-based strategy and growth-controlled interphenotypic coordination

scientific article published on 11 February 2014

Oral antioxidant supplementation does not prevent acute mountain sickness: double blind, randomized placebo-controlled trial.

scientific article

Influenza--time to target the host?

scientific article published on July 2013

FANTOM5 CAGE profiles of human and mouse samples

scientific article published on 29 August 2017

Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease.

scientific article

The 2018 Lake Louise Acute Mountain Sickness Score

article

Change in plasma vascular endothelial growth factor during onset and recovery from acute mountain sickness

scientific article published on 04 August 2006

High altitude adaptation in Daghestani populations from the Caucasus

scientific article published on 9 September 2011

An updated systematic review of the role of host genetics in susceptibility to influenza

scientific article

The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis

scientific article

Genetic mechanisms of critical illness in Covid-19

scientific article published on 11 December 2020

Incidence and predictors of acute mountain sickness among trekkers on Mount Kilimanjaro.

scientific article published on January 2010

Open source clinical science for emerging infections

scientific article published in January 2014

Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions.

scientific article

Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla--selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses

scientific article

Network analysis reveals distinct clinical syndromes underlying acute mountain sickness

scientific article published on 22 January 2014

Endogenous urate production augments plasma antioxidant capacity in healthy lowland subjects exposed to high altitude.

scientific article

The mechanism of action of gabapentin in neuropathic pain.

scientific article

Identification of novel genes selectively expressed in the follicle-associated epithelium from the meta-analysis of transcriptomics data from multiple mouse cell and tissue populations.

scientific article

Sildenafil citrate for the prevention of high altitude hypoxic pulmonary hypertension: double blind, randomized, placebo-controlled trial

scientific article

NT-proBNP does not rise on acute ascent to high altitude

article

Targeting the host immune response to fight infection

scientific article

High altitude pulmonary oedema.

scientific article published on March 2011

Is somatic retrotransposition a parasitic or symbiotic phenomenon?

scientific article published on November 2011

Features of 16,749 hospitalised UK patients with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol

scientific article published on 28 April 2020

Morphine, Gabapentin, or Their Combination for Neuropathic Pain

scientific article published on 01 June 2005

The utility of peripheral blood leucocyte ratios as biomarkers in infectious diseases: A systematic review and meta-analysis

scientific article published on 22 February 2019

Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease.

scientific article published in March 2018

Genome-wide CRISPR screen identifies host dependency factors for influenza A virus infection

scientific article published on 09 January 2020

Wide variation and systematic bias in expert clinicians' perceptions of prognosis following brain injury.

scientific article

List of works by John Kenneth Baillie

An atlas of active enhancers across human cell types and tissues

A promoter-level mammalian expression atlas

IFITM3 restricts the morbidity and mortality associated with influenza

Somatic retrotransposition alters the genetic landscape of the human brain

Clinical evidence does not support corticosteroid treatment for 2019-nCoV lung injury

Microglial brain region-dependent diversity and selective regional sensitivities to aging.

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

Gateways to the FANTOM5 promoter level mammalian expression atlas

The effectiveness of convalescent plasma and hyperimmune immunoglobulin for the treatment of severe acute respiratory infections of viral etiology: a systematic review and exploratory meta-analysis

Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma

Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages

Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: prospective observational cohort study

Middle East Respiratory Syndrome.

An expression atlas of human primary cells: inference of gene function from coexpression networks

A gene expression atlas of the domestic pig

Antiviral combinations for severe influenza

The role of host genetics in susceptibility to influenza: a systematic review

Meta-analysis of lineage-specific gene expression signatures in mouse leukocyte populations

Functional clustering and lineage markers: insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations

Expression of mesenchyme-specific gene signatures by follicular dendritic cells: insights from the meta-analysis of microarray data from multiple mouse cell populations

Heteroresistance at the single-cell level: adapting to antibiotic stress through a population-based strategy and growth-controlled interphenotypic coordination

Oral antioxidant supplementation does not prevent acute mountain sickness: double blind, randomized placebo-controlled trial.

Influenza--time to target the host?

FANTOM5 CAGE profiles of human and mouse samples

Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease.

The 2018 Lake Louise Acute Mountain Sickness Score

Change in plasma vascular endothelial growth factor during onset and recovery from acute mountain sickness

High altitude adaptation in Daghestani populations from the Caucasus

An updated systematic review of the role of host genetics in susceptibility to influenza

The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis

Genetic mechanisms of critical illness in Covid-19

Incidence and predictors of acute mountain sickness among trekkers on Mount Kilimanjaro.

Open source clinical science for emerging infections

Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions.

Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla--selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses

Network analysis reveals distinct clinical syndromes underlying acute mountain sickness

Endogenous urate production augments plasma antioxidant capacity in healthy lowland subjects exposed to high altitude.

The mechanism of action of gabapentin in neuropathic pain.

Identification of novel genes selectively expressed in the follicle-associated epithelium from the meta-analysis of transcriptomics data from multiple mouse cell and tissue populations.

Sildenafil citrate for the prevention of high altitude hypoxic pulmonary hypertension: double blind, randomized, placebo-controlled trial

NT-proBNP does not rise on acute ascent to high altitude

Targeting the host immune response to fight infection

High altitude pulmonary oedema.

Is somatic retrotransposition a parasitic or symbiotic phenomenon?

Features of 16,749 hospitalised UK patients with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol

Morphine, Gabapentin, or Their Combination for Neuropathic Pain

The utility of peripheral blood leucocyte ratios as biomarkers in infectious diseases: A systematic review and meta-analysis

Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease.

Genome-wide CRISPR screen identifies host dependency factors for influenza A virus infection

Wide variation and systematic bias in expert clinicians' perceptions of prognosis following brain injury.