List of works - Jean-Luc Pellequer

Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily.

scientific article

Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools

scientific article published in March 2007

BEPITOPE: predicting the location of continuous epitopes and patterns in proteins

scientific article published on 01 January 2003

Correlation between the location of antigenic sites and the prediction of turns in proteins

scientific article published on 01 April 1993

8 Predicting location of continuous epitopes in proteins from their primary structures

scientific article published on January 1, 1991

Past, present and future of atomic force microscopy in life sciences and medicine

scientific article

Substrate specificity of prostate-specific antigen (PSA)

scientific article published on 01 September 1998

An engineered interdomain disulfide bond stabilizes human blood coagulation factor VIIIa

scientific article published in September 2003

Interdomain engineered disulfide bond permitting elucidation of mechanisms of inactivation of coagulation factor Va by activated protein C

scientific article

Single and multiple bonds in (strept)avidin-biotin interactions

scientific article

PREDITOP: a program for antigenicity prediction

scientific article published in September 1993

Standardized Nanomechanical Atomic Force Microscopy Procedure (SNAP) for Measuring Soft and Biological Samples

scientific article

Intrinsic stability and functional properties of disulfide bond-stabilized coagulation factor VIIIa variants

scientific article published in June 2006

Low phosphate activates STOP1-ALMT1 to rapidly inhibit root cell elongation

scientific article

Multi-template approach to modeling engineered disulfide bonds

scientific article published in October 2006

The sodium/iodide symporter: state of the art of its molecular characterization.

scientific article published on 27 August 2013

Identification, purification, and characterization of an eukaryotic-like phosphopantetheine adenylyltransferase (coenzyme A biosynthetic pathway) in the hyperthermophilic archaeon Pyrococcus abyssi.

scientific article

Externalized histone H4 orchestrates chronic inflammation by inducing lytic cell death

scientific article published on 01 May 2019

Predicting antigenic determinants in proteins: looking for unidimensional solutions to a three-dimensional problem?

scientific article published on July 1994

DeStripe: frequency-based algorithm for removing stripe noises from AFM images.

scientific article

Measurement of kinetic binding constants of viral antibodies using a new biosensor technology

scientific article published on 01 November 1993

Pilot in vivo toxicological investigation of boron nitride nanotubes

scientific article

Homology models of the C domains of blood coagulation factors V and VIII: a proposed membrane binding mode for FV and FVIII C2 domains

scientific article published on 01 December 1998

Nanoscale structural features determined by AFM for single virus particles

scientific article published on 9 September 2013

Characterization of a factor Xa binding site on factor Va near the Arg-506 activated protein C cleavage site

scientific article published on 6 June 2007

Three-dimensional model of coagulation factor Va bound to activated protein C

scientific article published on 01 November 2000

Tobacco mosaic virus as an AFM tip calibrator

scientific article published in May 2011

Identification of functionally important residues in proteins using comparative models.

scientific article published on March 2004

Eukaryotic GPN-loop GTPases paralogs use a dimeric assembly reminiscent of archeal GPN.

scientific article

Operational aspects of antibody affinity constants measured by liquid-phase and solid-phase assays

scientific article published on 01 March 1992

Predicting the disruption by UO2(2+) of a protein-ligand interaction.

scientific article

Affinity of monoclonal antibodies to large multivalent antigens: influence of steric hindrance on antibody affinity constants calculated from Scatchard plots

scientific article published in July 1993

Does conformational free energy distinguish loop conformations in proteins?

scientific article published on November 1997

Computational reconstruction of multidomain proteins using atomic force microscopy data

scientific article

Stabilization of bound polycyclic aromatic hydrocarbons by a pi-cation interaction

scientific article published on 01 September 2000

Unraveling the effect of changes in conformation and compactness at the antibody V(L)-V(H) interface upon antigen binding

scientific article

Virus particle assembly into crystalline domains enabled by the coffee ring effect

scientific article published on August 2014

An integrated methodology for data processing in dynamic force spectroscopy of ligand-receptor binding.

scientific article

Structural basis for preferential binding of non-ortho-substituted polychlorinated biphenyls by the monoclonal antibody S2B1.

scientific article published in July 2005

Model of a ternary complex between activated factor VII, tissue factor and factor IX

scientific article published on 01 July 2002

Adepth: New Representation and its implications for atomic depths of macromolecules.

scientific article published on 22 April 2013

Conformational dynamics of individual antibodies using computational docking and AFM.

scientific article

Is the coexistence of thromboembolic events and Factor VII deficiency fortuitous?

scientific article published on October 1, 2012

Deciphering the energy landscape of the interaction uranyl-DCP with antibodies using dynamic force spectroscopy

scientific article published on 12 September 2008

Deciphering structure and topology of conserved COG2042 orphan proteins

scientific article

Safety, Stability and Pharmacokinetic Properties of (super)Factor Va, a Novel Engineered Coagulation Factor V for Treatment of Severe Bleeding.

scientific article published on 9 March 2016

Atomic force microscope, molecular imaging, and analysis

scientific article published on 30 July 2015

Mapping the Epitopes of a Neutralizing Antibody Fragment Directed against the Lethal Factor of Bacillus anthracis and Cross-Reacting with the Homologous Edema Factor

scientific article published on May 31, 2013

Factor Va alternative conformation reconstruction using atomic force microscopy.

scientific article

On the Operational Aspects of Measuring Nanoparticle Sizes

scientific article published on 23 December 2018

List of works by Jean-Luc Pellequer

Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily.

Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools

BEPITOPE: predicting the location of continuous epitopes and patterns in proteins

Correlation between the location of antigenic sites and the prediction of turns in proteins

8 Predicting location of continuous epitopes in proteins from their primary structures

Past, present and future of atomic force microscopy in life sciences and medicine

Substrate specificity of prostate-specific antigen (PSA)

An engineered interdomain disulfide bond stabilizes human blood coagulation factor VIIIa

Interdomain engineered disulfide bond permitting elucidation of mechanisms of inactivation of coagulation factor Va by activated protein C

Single and multiple bonds in (strept)avidin-biotin interactions

PREDITOP: a program for antigenicity prediction

Standardized Nanomechanical Atomic Force Microscopy Procedure (SNAP) for Measuring Soft and Biological Samples

Intrinsic stability and functional properties of disulfide bond-stabilized coagulation factor VIIIa variants

Low phosphate activates STOP1-ALMT1 to rapidly inhibit root cell elongation

Multi-template approach to modeling engineered disulfide bonds

The sodium/iodide symporter: state of the art of its molecular characterization.

Identification, purification, and characterization of an eukaryotic-like phosphopantetheine adenylyltransferase (coenzyme A biosynthetic pathway) in the hyperthermophilic archaeon Pyrococcus abyssi.

Externalized histone H4 orchestrates chronic inflammation by inducing lytic cell death

Predicting antigenic determinants in proteins: looking for unidimensional solutions to a three-dimensional problem?

DeStripe: frequency-based algorithm for removing stripe noises from AFM images.

Measurement of kinetic binding constants of viral antibodies using a new biosensor technology

Pilot in vivo toxicological investigation of boron nitride nanotubes

Homology models of the C domains of blood coagulation factors V and VIII: a proposed membrane binding mode for FV and FVIII C2 domains

Nanoscale structural features determined by AFM for single virus particles

Characterization of a factor Xa binding site on factor Va near the Arg-506 activated protein C cleavage site

Three-dimensional model of coagulation factor Va bound to activated protein C

Tobacco mosaic virus as an AFM tip calibrator

Identification of functionally important residues in proteins using comparative models.

Eukaryotic GPN-loop GTPases paralogs use a dimeric assembly reminiscent of archeal GPN.

Operational aspects of antibody affinity constants measured by liquid-phase and solid-phase assays

Predicting the disruption by UO2(2+) of a protein-ligand interaction.

Affinity of monoclonal antibodies to large multivalent antigens: influence of steric hindrance on antibody affinity constants calculated from Scatchard plots

Does conformational free energy distinguish loop conformations in proteins?

Computational reconstruction of multidomain proteins using atomic force microscopy data

Stabilization of bound polycyclic aromatic hydrocarbons by a pi-cation interaction

Unraveling the effect of changes in conformation and compactness at the antibody V(L)-V(H) interface upon antigen binding

Virus particle assembly into crystalline domains enabled by the coffee ring effect

An integrated methodology for data processing in dynamic force spectroscopy of ligand-receptor binding.

Structural basis for preferential binding of non-ortho-substituted polychlorinated biphenyls by the monoclonal antibody S2B1.

Model of a ternary complex between activated factor VII, tissue factor and factor IX

Adepth: New Representation and its implications for atomic depths of macromolecules.

Conformational dynamics of individual antibodies using computational docking and AFM.

Is the coexistence of thromboembolic events and Factor VII deficiency fortuitous?

Deciphering the energy landscape of the interaction uranyl-DCP with antibodies using dynamic force spectroscopy

Deciphering structure and topology of conserved COG2042 orphan proteins

Safety, Stability and Pharmacokinetic Properties of (super)Factor Va, a Novel Engineered Coagulation Factor V for Treatment of Severe Bleeding.

Atomic force microscope, molecular imaging, and analysis

Mapping the Epitopes of a Neutralizing Antibody Fragment Directed against the Lethal Factor of Bacillus anthracis and Cross-Reacting with the Homologous Edema Factor

Factor Va alternative conformation reconstruction using atomic force microscopy.

On the Operational Aspects of Measuring Nanoparticle Sizes