List of works - Jerzy Ostrowski

Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data directed for maximization of analytical reliability

scientific article

Integrating proteomic and transcriptomic high-throughput surveys for search of new biomarkers of colon tumors

scientific article published on 9 November 2010

Landscape of the hnRNP K protein-protein interactome

scientific journal article

Lack of evidence for association of primary sclerosing cholangitis and primary biliary cirrhosis with risk alleles for Crohn's disease in Polish patients.

scientific article

Nuclear shift of hnRNP K protein in neoplasms and other states of enhanced cell proliferation.

scientific article published on October 2003

Heterogeneous nuclear ribonucleoprotein K protein associates with multiple mitochondrial transcripts within the organelle.

scientific article

PDL1 expression is an independent prognostic factor in localized GIST.

scientific article published on 3 February 2015

Quantitative detection for low levels of Helicobacter pylori infection in experimentally infected mice by real-time PCR.

scientific article published in November 2003

DNA methylation status is more reliable than gene expression at detecting cancer in prostate biopsy

scientific article published on 17 June 2014

Molecular defense mechanisms of Barrett's metaplasia estimated by an integrative genomics

scientific article published on 30 March 2007

Cooperative binding of the hnRNP K three KH domains to mRNA targets

scientific article published on 01 November 2004

Characterization of hnRNP K protein-RNA interactions.

scientific article

Expression changes of cell-cell adhesion-related genes in colorectal tumors.

scientific article published on 8 April 2015

Editing of hnRNP K protein mRNA in colorectal adenocarcinoma and surrounding mucosa

scientific article

New recurrent BRCA1/2 mutations in Polish patients with familial breast/ovarian cancer detected by next generation sequencing

scientific article published on 7 May 2015

The fold recognition of CP2 transcription factors gives new insights into the function and evolution of tumor suppressor protein p53.

scientific article

SEL120-34A is a novel CDK8 inhibitor active in AML cells with high levels of serine phosphorylation of STAT1 and STAT5 transactivation domains

scientific article

Pooled sample-based GWAS: a cost-effective alternative for identifying colorectal and prostate cancer risk variants in the Polish population

scientific article

Histone H3 lysine 27 acetylation is altered in colon cancer

scientific article published on June 3, 2014

An integrated LC-ESI-MS platform for quantitation of serum peptide ladders. Application for colon carcinoma study.

scientific article published on 30 July 2009

Integrating genomics, proteomics and bioinformatics in translational studies of molecular medicine.

scientific article published on September 2009

Heterogeneous nuclear ribonucleoprotein (HnRNP) K genome-wide binding survey reveals its role in regulating 3'-end RNA processing and transcription termination at the early growth response 1 (EGR1) gene through XRN2 exonuclease

scientific article published on 15 July 2013

Do altering in ornithine decarboxylase activity and gene expression contribute to antiproliferative properties of COX inhibitors?

scientific article (publication date: 7 April 2003)

Limited prolonged effects of rifaximin treatment on irritable bowel syndrome-related differences in the fecal microbiome and metabolome.

scientific article published on 26 July 2016

Homoplasmic MELAS A3243G mtDNA mutation in a colon cancer sample

scientific article published in October 2003

Mutations, methylation and expression of CDKN2a/p16 gene in colorectal cancer and normal colonic mucosa

scientific article published in February 2001

Stimulation of p85/RING3 kinase in multiple organs after systemic administration of mitogens into mice

scientific article published on March 5, 1998

High frequency of BRCA1 founder mutations in Polish women with nonfamilial breast cancer

scientific article published on 01 December 2012

Prolonged transfer of feces from the lean mice modulates gut microbiota in obese mice.

scientific article published on 23 August 2016

VacA genotyping directly from gastric biopsy specimens and estimation of mixed Helicobacter pylori infections in patients with duodenal ulcer and gastritis

scientific article published on 01 August 1999

RACK1 protein interacts with Helicobacter pylori VacA cytotoxin: the yeast two-hybrid approach.

scientific article

Helicobacter pylori protein oxidation influences the colonization process

scientific article published on 20 March 2006

Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles

scientific article

Obesity increases histone H3 lysine 9 and 18 acetylation at Tnfa and Ccl2 genes in mouse liver

scientific article published on 03 October 2014

Limited clinical relevance of mitochondrial DNA mutation and gene expression analyses in ovarian cancer

scientific article

Genetic architecture differences between pediatric and adult-onset inflammatory bowel diseases in the Polish population.

scientific article published on 23 December 2016

Ischemia-induced modifications of protein components of rat brain postsynaptic densities

scientific article published in April 1999

Regulation of the expression of claudin 23 by the enhancer of zeste 2 polycomb group protein in colorectal cancer.

scientific article

Extracellular matrix and cytochrome P450 gene expression can distinguish steatohepatitis from steatosis in mice.

scientific article published on 9 June 2014

Genome-wide co-localization of active EGFR and downstream ERK pathway kinases mirrors mitogen-inducible RNA polymerase 2 genomic occupancy.

scientific article published on September 2016

Three clinical variants of gastroesophageal reflux disease form two distinct gene expression signatures.

scientific article

Increased constitutive activity of mitogen-activated protein kinase and renaturable 85 kDa kinase in human-colorectal cancer.

scientific article published on November 1998

Comparative kinome analysis to identify putative colon tumor biomarkers

scientific article published on November 18, 2011

Effect of Saccharomyces boulardii and Mode of Delivery on the Early Development of the Gut Microbial Community in Preterm Infants.

scientific article

Identification of a late onset Alzheimer's disease candidate risk variant at 9q21.33 in Polish patients.

scientific article

Casein kinases phosphorylate multiple residues spanning the entire hnRNP K length

scientific article published on 06 January 2006

Limited predictive value of achieving beneficial plasma (Z)-endoxifen threshold level by CYP2D6 genotyping in tamoxifen-treated Polish women with breast cancer.

scientific article published on August 2015

Increased mitochondrial gene expression during L6 cell myogenesis is accelerated by insulin

scientific article published on 11 March 2005

Pre-analytical-related variability influencing serum peptide profiles demonstrated in a mass spectrometry-based search for colorectal and prostate cancer biomarkers

scientific article published on September 18, 2013

A preliminary evaluation of next-generation sequencing as a screening tool for targeted genotyping of erythrocyte and platelet antigens in blood donors.

scientific article

List of works by Jerzy Ostrowski

Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data directed for maximization of analytical reliability

Integrating proteomic and transcriptomic high-throughput surveys for search of new biomarkers of colon tumors

Landscape of the hnRNP K protein-protein interactome

Lack of evidence for association of primary sclerosing cholangitis and primary biliary cirrhosis with risk alleles for Crohn's disease in Polish patients.

Nuclear shift of hnRNP K protein in neoplasms and other states of enhanced cell proliferation.

Heterogeneous nuclear ribonucleoprotein K protein associates with multiple mitochondrial transcripts within the organelle.

PDL1 expression is an independent prognostic factor in localized GIST.

Quantitative detection for low levels of Helicobacter pylori infection in experimentally infected mice by real-time PCR.

DNA methylation status is more reliable than gene expression at detecting cancer in prostate biopsy

Molecular defense mechanisms of Barrett's metaplasia estimated by an integrative genomics

Cooperative binding of the hnRNP K three KH domains to mRNA targets

Characterization of hnRNP K protein-RNA interactions.

Expression changes of cell-cell adhesion-related genes in colorectal tumors.

Editing of hnRNP K protein mRNA in colorectal adenocarcinoma and surrounding mucosa

New recurrent BRCA1/2 mutations in Polish patients with familial breast/ovarian cancer detected by next generation sequencing

The fold recognition of CP2 transcription factors gives new insights into the function and evolution of tumor suppressor protein p53.

SEL120-34A is a novel CDK8 inhibitor active in AML cells with high levels of serine phosphorylation of STAT1 and STAT5 transactivation domains

Pooled sample-based GWAS: a cost-effective alternative for identifying colorectal and prostate cancer risk variants in the Polish population

Histone H3 lysine 27 acetylation is altered in colon cancer

An integrated LC-ESI-MS platform for quantitation of serum peptide ladders. Application for colon carcinoma study.

Integrating genomics, proteomics and bioinformatics in translational studies of molecular medicine.

Heterogeneous nuclear ribonucleoprotein (HnRNP) K genome-wide binding survey reveals its role in regulating 3'-end RNA processing and transcription termination at the early growth response 1 (EGR1) gene through XRN2 exonuclease

Do altering in ornithine decarboxylase activity and gene expression contribute to antiproliferative properties of COX inhibitors?

Limited prolonged effects of rifaximin treatment on irritable bowel syndrome-related differences in the fecal microbiome and metabolome.

Homoplasmic MELAS A3243G mtDNA mutation in a colon cancer sample

Mutations, methylation and expression of CDKN2a/p16 gene in colorectal cancer and normal colonic mucosa

Stimulation of p85/RING3 kinase in multiple organs after systemic administration of mitogens into mice

High frequency of BRCA1 founder mutations in Polish women with nonfamilial breast cancer

Prolonged transfer of feces from the lean mice modulates gut microbiota in obese mice.

VacA genotyping directly from gastric biopsy specimens and estimation of mixed Helicobacter pylori infections in patients with duodenal ulcer and gastritis

RACK1 protein interacts with Helicobacter pylori VacA cytotoxin: the yeast two-hybrid approach.

Helicobacter pylori protein oxidation influences the colonization process

Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles

Obesity increases histone H3 lysine 9 and 18 acetylation at Tnfa and Ccl2 genes in mouse liver

Limited clinical relevance of mitochondrial DNA mutation and gene expression analyses in ovarian cancer

Genetic architecture differences between pediatric and adult-onset inflammatory bowel diseases in the Polish population.

Ischemia-induced modifications of protein components of rat brain postsynaptic densities

Regulation of the expression of claudin 23 by the enhancer of zeste 2 polycomb group protein in colorectal cancer.

Extracellular matrix and cytochrome P450 gene expression can distinguish steatohepatitis from steatosis in mice.

Genome-wide co-localization of active EGFR and downstream ERK pathway kinases mirrors mitogen-inducible RNA polymerase 2 genomic occupancy.

Three clinical variants of gastroesophageal reflux disease form two distinct gene expression signatures.

Increased constitutive activity of mitogen-activated protein kinase and renaturable 85 kDa kinase in human-colorectal cancer.

Comparative kinome analysis to identify putative colon tumor biomarkers

Effect of Saccharomyces boulardii and Mode of Delivery on the Early Development of the Gut Microbial Community in Preterm Infants.

Identification of a late onset Alzheimer's disease candidate risk variant at 9q21.33 in Polish patients.

Casein kinases phosphorylate multiple residues spanning the entire hnRNP K length

Limited predictive value of achieving beneficial plasma (Z)-endoxifen threshold level by CYP2D6 genotyping in tamoxifen-treated Polish women with breast cancer.

Increased mitochondrial gene expression during L6 cell myogenesis is accelerated by insulin

Pre-analytical-related variability influencing serum peptide profiles demonstrated in a mass spectrometry-based search for colorectal and prostate cancer biomarkers

A preliminary evaluation of next-generation sequencing as a screening tool for targeted genotyping of erythrocyte and platelet antigens in blood donors.