List of works - Katherine A Dunn

A new time-scale for ray-finned fish evolution

scientific article (publication date: 22 February 2007)

Multilocus genotyping assays for single nucleotide polymorphism-based subtyping of Listeria monocytogenes isolates.

scientific article published on 17 October 2008

Phylogenomic analysis of natural selection pressure in Streptococcus genomes

scientific article

Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment.

scholarly article

Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.

scientific article

Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton.

scientific article published on 22 September 2014

BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities

scientific article

BioMiCo: a supervised Bayesian model for inference of microbial community structure.

scientific article

Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept".

scientific article

Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution

scientific article published on 26 June 2008

Early Changes in Microbial Community Structure Are Associated with Sustained Remission After Nutritional Treatment of Pediatric Crohn's Disease.

scientific article

The Gut Microbiome of Pediatric Crohn's Disease Patients Differs from Healthy Controls in Genes That Can Influence the Balance Between a Healthy and Dysregulated Immune Response

scientific article

Functional Divergence of the Nuclear Receptor NR2C1 as a Modulator of Pluripotentiality During Hominid Evolution

scientific article

Novel Strategies for Applied Metagenomics.

scientific article published on 4 February 2016

Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data.

scientific article

Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices

scientific article (publication date: 2013)

A Robust ANOVA Approach to Estimating a Phylogeny from Multiple Genes

scientific article published on 3 April 2015

Investigating the gut microbial community and genes in children with differing levels of change in serum asparaginase activity during pegaspargase treatment for acute lymphoblastic leukemia

scientific article published on 01 December 2020

List of works by Katherine A Dunn

A new time-scale for ray-finned fish evolution

Multilocus genotyping assays for single nucleotide polymorphism-based subtyping of Listeria monocytogenes isolates.

Phylogenomic analysis of natural selection pressure in Streptococcus genomes

Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment.

Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.

Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton.

BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities

BioMiCo: a supervised Bayesian model for inference of microbial community structure.

Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept".

Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution

Early Changes in Microbial Community Structure Are Associated with Sustained Remission After Nutritional Treatment of Pediatric Crohn's Disease.

The Gut Microbiome of Pediatric Crohn's Disease Patients Differs from Healthy Controls in Genes That Can Influence the Balance Between a Healthy and Dysregulated Immune Response

Functional Divergence of the Nuclear Receptor NR2C1 as a Modulator of Pluripotentiality During Hominid Evolution

Novel Strategies for Applied Metagenomics.

Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data.

Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices

A Robust ANOVA Approach to Estimating a Phylogeny from Multiple Genes

Investigating the gut microbial community and genes in children with differing levels of change in serum asparaginase activity during pegaspargase treatment for acute lymphoblastic leukemia