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List of works by Mark J. Cowley

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Whole genomes redefine the mutational landscape of pancreatic cancer

scientific article published in February 2015
Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes

scientific article
Genomic analyses identify molecular subtypes of pancreatic cancer

scientific article published on 24 February 2016
PINA v2.0: mining interactome modules.

scientific article published on 8 November 2011
Whole-genome landscape of pancreatic neuroendocrine tumours.

scientific article published on 15 February 2017
Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity

scientific article
Inheritance of coronary artery disease in men: an analysis of the role of the Y chromosome

scientific article published on 9 February 2012
Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling.

scientific article published on 9 May 2014
Mutation allele burden remains unchanged in chronic myelomonocytic leukaemia responding to hypomethylating agents

scientific article published on 24 February 2016
Differential regulation of the Let-7 family of microRNAs in CD4+ T cells alters IL-10 expression.

scientific article published on 14 May 2012
Normalization and statistical analysis of quantitative proteomics data generated by metabolic labeling

scientific article
Gene-expression profiling of gram-positive and gram-negative sepsis in critically ill patients

scientific article
c-Myc and Her2 cooperate to drive a stem-like phenotype with poor prognosis in breast cancer.

scientific article published on 23 September 2013
Clinical and molecular characterization of HER2 amplified-pancreatic cancer.

scientific article published on 31 August 2013
qpure: A tool to estimate tumor cellularity from genome-wide single-nucleotide polymorphism profiles

scientific article
Hypermutation In Pancreatic Cancer

scientific article
ELF5 suppresses estrogen sensitivity and underpins the acquisition of antiestrogen resistance in luminal breast cancer.

scientific article
Influence of atrial fibrillation on microRNA expression profiles in left and right atria from patients with valvular heart disease

scientific article published on 6 December 2011
Neuropilin-2 promotes extravasation and metastasis by interacting with endothelial α5 integrin

scientific article published on 20 May 2013
Histomolecular phenotypes and outcome in adenocarcinoma of the ampulla of vater

scientific article published on 25 February 2013
A sustained dietary change increases epigenetic variation in isogenic mice

scientific article
Maternal obesity and diabetes induces latent metabolic defects and widespread epigenetic changes in isogenic mice

scientific article published on 26 April 2013
Cold adaptation in the marine bacterium, Sphingopyxis alaskensis, assessed using quantitative proteomics

scientific article published in October 2010
Somatic point mutation calling in low cellularity tumors.

scientific article
Cell and molecular determinants of in vivo efficacy of the BH3 mimetic ABT-263 against pediatric acute lymphoblastic leukemia xenografts

scientific article
Impaired B cell development in the absence of Krüppel-like factor 3.

scientific article
Whole-exome sequencing reanalysis at 12 months boosts diagnosis and is cost-effective when applied early in Mendelian disorders

scientific article published on 29 March 2018
Human islets express a marked proinflammatory molecular signature prior to transplantation.

scientific article published on 8 March 2012
SOX9 regulates ERBB signalling in pancreatic cancer development.

scientific article published on 21 October 2014
BCL-2 hypermethylation is a potential biomarker of sensitivity to antimitotic chemotherapy in endocrine-resistant breast cancer

scientific article published on 16 July 2013
Tailored first-line and second-line CDK4-targeting treatment combinations in mouse models of pancreatic cancer

scientific article published on 28 October 2017
MicroRNA profiling of the pubertal mouse mammary gland identifies miR-184 as a candidate breast tumour suppressor gene

scientific article published on 13 June 2015
Sirtuin-1 regulates acinar-to-ductal metaplasia and supports cancer cell viability in pancreatic cancer

scientific article published on 31 January 2013
Understanding pancreatic cancer genomes

scientific article published on August 2013
A SLC39A8 variant causes manganese deficiency, and glycosylation and mitochondrial disorders.

scientific article
SerpinB2 regulates stromal remodelling and local invasion in pancreatic cancer.

scientific article published on 27 March 2017
A Mild PUM1 Mutation Is Associated with Adult-Onset Ataxia, whereas Haploinsufficiency Causes Developmental Delay and Seizures

scientific article published in February 2018
Clinical and pathologic features of familial pancreatic cancer

scientific article published on 14 October 2014
Whole-genome sequencing overcomes pseudogene homology to diagnose autosomal dominant polycystic kidney disease

scientific article
Normalization procedures and detection of linkage signal in genetical-genomics experiments

scientific article published on 01 August 2006
Detection of growth hormone doping by gene expression profiling of peripheral blood

scientific article
MECR Mutations Cause Childhood-Onset Dystonia and Optic Atrophy, a Mitochondrial Fatty Acid Synthesis Disorder

scientific journal article
Asparagine Synthetase Deficiency causes reduced proliferation of cells under conditions of limited asparagine.

scientific article published on 14 August 2015
Expression of pro- and antiapoptotic molecules of the Bcl-2 family in human islets postisolation

scientific article
Clonal expansions of cytotoxic T cells exist in the blood of patients with Waldenstrom macroglobulinemia but exhibit anergic properties and are eliminated by nucleoside analogue therapy

scientific article published on 26 February 2010
Proteomic comparison of colorectal tumours and non-neoplastic mucosa from paired patient samples using iTRAQ mass spectrometry.

scientific article published on 02 August 2011
Intra- and inter-individual genetic differences in gene expression

scientific article published on 08 May 2009
Germline variants in familial pituitary tumour syndrome genes are common in young patients and families with additional endocrine tumours

scientific article published on 20 February 2017
A preexistent hypoxic gene signature predicts impaired islet graft function and glucose homeostasis

scientific article
Whole Genome Sequencing Improves Outcomes of Genetic Testing in Patients With Hypertrophic Cardiomyopathy

scientific article published on 01 July 2018

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