List of works - Elinor K. Karlsson

Initial sequencing and comparative analysis of the mouse genome

scientific article

Genome sequence, comparative analysis and haplotype structure of the domestic dog

scientific article

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

scientific article

A composite of multiple signals distinguishes causal variants in regions of positive selection

scientific article

Efficient mapping of mendelian traits in dogs through genome-wide association

scientific article

Genomic targets of nuclear estrogen receptors

scientific article published on 18 March 2004

Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping

scientific article

Identifying recent adaptations in large-scale genomic data

scientific article

Leader of the pack: gene mapping in dogs and other model organisms

scientific article published on September 2008

Natural selection and infectious disease in human populations

scientific article published on 29 April 2014

Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs

scientific article

Rethinking dog domestication by integrating genetics, archeology, and biogeography

scientific article

Assembly of polymorphic genomes: algorithms and application to Ciona savignyi

scientific article published on August 2005

A mutation in hairless dogs implicates FOXI3 in ectodermal development

scientific article

Genome-wide association mapping identifies multiple loci for a canine SLE-related disease complex

article

Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum

scientific article

A novel unstable duplication upstream of HAS2 predisposes to a breed-defining skin phenotype and a periodic fever syndrome in Chinese Shar-Pei dogs

scientific article

Genome-wide analyses implicate 33 loci in heritable dog osteosarcoma, including regulatory variants near CDKN2A/B

scientific article

Jagged 1 Rescues the Duchenne Muscular Dystrophy Phenotype

scientific article

LGI2 truncation causes a remitting focal epilepsy in dogs

scientific article

Natural selection in a bangladeshi population from the cholera-endemic ganges river delta

scientific article

Candidate genes and functional noncoding variants identified in a canine model of obsessive-compulsive disorder

scientific article

Construction of a 2-Mb resolution BAC microarray for CGH analysis of canine tumors

scientific article published in December 2005

Genome-wide association study identifies shared risk loci common to two malignancies in golden retrievers

scientific article

A cytogenetically characterized, genome-anchored 10-Mb BAC set and CGH array for the domestic dog.

scientific article published on 16 August 2007

Comparative proteomic analysis reveals activation of mucosal innate immune signaling pathways during cholera

scientific article

A genome assembly-integrated dog 1 Mb BAC microarray: a cytogenetic resource for canine cancer studies and comparative genomic analysis

scientific article

Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates

scientific article published on 21 August 2020

A genetic basis of variation in eccrine sweat gland and hair follicle density

scientific article

A simple repeat polymorphism in the MITF-M promoter is a key regulator of white spotting in dogs

scientific article

Integrating evolutionary and regulatory information with a multispecies approach implicates genes and pathways in obsessive-compulsive disorder

scientific article published on 17 October 2017

Evaluation of the serotonergic genes htr1A, htr1B, htr2A, and slc6A4 in aggressive behavior of golden retriever dogs

scientific article

Comparative Genomics Reveals Shared Mutational Landscape in Canine Hemangiosarcoma and Human Angiosarcoma

scientific article published on 30 September 2019

Microarray-based cytogenetic profiling reveals recurrent and subtype-associated genomic copy number aberrations in feline sarcomas

scientific article published on 26 November 2009

Analysis of the Human Mucosal Response to Cholera Reveals Sustained Activation of Innate Immune Signaling Pathways

scientific article published on 13 November 2017

Progressive Cactus is a multiple-genome aligner for the thousand-genome era

scientific article published on 11 November 2020

Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals

scientific article published on 26 November 2019

Broad Host Range of SARS-CoV-2 Predicted by Comparative and Structural Analysis of ACE2 in Vertebrates

scientific article published on 18 April 2020

Reconsidering domestication from a process archaeology perspective

scientific article published in January 2021

Humanity’s Best Friend: A Dog-Centric Approach to Addressing Global Challenges

scientific article published on 17 March 2020

Examination of Huntington's disease with atypical clinical features in a Bangladeshi family tree

scientific article published on 11 November 2016

BarkBase: Epigenomic Annotation of Canine Genomes

scientific article published on 07 June 2019

Integrating gene annotation with orthology inference at scale

scientific article published on 28 April 2023

List of works by Elinor K. Karlsson

Initial sequencing and comparative analysis of the mouse genome

Genome sequence, comparative analysis and haplotype structure of the domestic dog

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

A composite of multiple signals distinguishes causal variants in regions of positive selection

Efficient mapping of mendelian traits in dogs through genome-wide association

Genomic targets of nuclear estrogen receptors

Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping

Identifying recent adaptations in large-scale genomic data

Leader of the pack: gene mapping in dogs and other model organisms

Natural selection and infectious disease in human populations

Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs

Rethinking dog domestication by integrating genetics, archeology, and biogeography

Assembly of polymorphic genomes: algorithms and application to Ciona savignyi

A mutation in hairless dogs implicates FOXI3 in ectodermal development

Genome-wide association mapping identifies multiple loci for a canine SLE-related disease complex

Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum

A novel unstable duplication upstream of HAS2 predisposes to a breed-defining skin phenotype and a periodic fever syndrome in Chinese Shar-Pei dogs

Genome-wide analyses implicate 33 loci in heritable dog osteosarcoma, including regulatory variants near CDKN2A/B

Jagged 1 Rescues the Duchenne Muscular Dystrophy Phenotype

LGI2 truncation causes a remitting focal epilepsy in dogs

Natural selection in a bangladeshi population from the cholera-endemic ganges river delta

Candidate genes and functional noncoding variants identified in a canine model of obsessive-compulsive disorder

Construction of a 2-Mb resolution BAC microarray for CGH analysis of canine tumors

Genome-wide association study identifies shared risk loci common to two malignancies in golden retrievers

A cytogenetically characterized, genome-anchored 10-Mb BAC set and CGH array for the domestic dog.

Comparative proteomic analysis reveals activation of mucosal innate immune signaling pathways during cholera

A genome assembly-integrated dog 1 Mb BAC microarray: a cytogenetic resource for canine cancer studies and comparative genomic analysis

Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates

A genetic basis of variation in eccrine sweat gland and hair follicle density

A simple repeat polymorphism in the MITF-M promoter is a key regulator of white spotting in dogs

Integrating evolutionary and regulatory information with a multispecies approach implicates genes and pathways in obsessive-compulsive disorder

Evaluation of the serotonergic genes htr1A, htr1B, htr2A, and slc6A4 in aggressive behavior of golden retriever dogs

Comparative Genomics Reveals Shared Mutational Landscape in Canine Hemangiosarcoma and Human Angiosarcoma

Microarray-based cytogenetic profiling reveals recurrent and subtype-associated genomic copy number aberrations in feline sarcomas

Analysis of the Human Mucosal Response to Cholera Reveals Sustained Activation of Innate Immune Signaling Pathways

Progressive Cactus is a multiple-genome aligner for the thousand-genome era

Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals

Broad Host Range of SARS-CoV-2 Predicted by Comparative and Structural Analysis of ACE2 in Vertebrates

Reconsidering domestication from a process archaeology perspective

Humanity’s Best Friend: A Dog-Centric Approach to Addressing Global Challenges

Examination of Huntington's disease with atypical clinical features in a Bangladeshi family tree

BarkBase: Epigenomic Annotation of Canine Genomes

Integrating gene annotation with orthology inference at scale

Evolution of the Dog Genome

Insights into mammalian TE diversity through the curation of 248 genome assemblies

Leveraging base-pair mammalian constraint to understand genetic variation and human disease

Rationale and design of the Dog Aging Project precision cohort: a multi-omic resource for longitudinal research in geroscience

Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder

Genome-wide association study identifies new locus associated with OCD

The functional and evolutionary impacts of human-specific deletions in conserved elements