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List of works by Mattias Jakobsson

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CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

scientific article (publication date: 15 July 2007)
Genotype, haplotype and copy-number variation in worldwide human populations

scientific article (publication date: 21 February 2008)
The pattern of polymorphism in Arabidopsis thaliana

scientific article
Clumpak: a program for identifying clustering modes and packaging population structure inferences across K.

scientific article published on 12 February 2015
A worldwide survey of haplotype variation and linkage disequilibrium in the human genome

scientific article published on 22 October 2006
ADZE: a rarefaction approach for counting alleles private to combinations of populations

scientific article (publication date: November 2008)
Genetic variation and population structure in native Americans

scientific article
Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

scientific article
Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe

scientific article
Genomic variation in seven Khoe-San groups reveals adaptation and complex African history

scientific article
The genome of a Late Pleistocene human from a Clovis burial site in western Montana

scientific article
Genomic diversity and admixture differs for Stone-Age Scandinavian foragers and farmers

scientific article
Genomic evidence for the Pleistocene and recent population history of Native Americans

scientific article
The genetic prehistory of the New World Arctic

scientific article
Demographic history of european populations of Arabidopsis thaliana

scientific article
Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal

scientific article (publication date: 11 February 2014)
Tracing the peopling of the world through genomics

scientific article
Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques

scientific article
Out of Africa: modern human origins special feature: explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa

scientific article
Joint analysis of demography and selection in population genetics: where do we stand and where could we go?

scientific article published on 14 October 2011
The relationship between F(ST) and the frequency of the most frequent allele.

scientific article published on 19 November 2012
A Unique Recent Origin of the Allotetraploid Species Arabidopsis suecica: Evidence from Nuclear DNA Markers

scientific article
Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection

scientific article (publication date: 13 August 2009)
Archaic human ancestry in East Asia

scientific article (publication date: 8 November 2011)
Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago.

scientific article
Accurate sex identification of ancient human remains using DNA shotgun sequencing

article by Pontus Skoglund et al published December 2013 in Journal of Archaeological Science
The origin and evolution of maize in the Southwestern United States

scientific article
Comparing spatial maps of human population-genetic variation using Procrustes analysis

scientific article
The Demographic Development of the First Farmers in Anatolia

scientific article
Genetic variation reveals large-scale population expansion and migration during the expansion of Bantu-speaking peoples

scientific article published on 10 September 2014
Lactase persistence alleles reveal partial East African ancestry of southern African Khoe pastoralists

scientific article
Genomic Evidence Establishes Anatolia as the Source of the European Neolithic Gene Pool

scientific article published on 29 December 2015
Human adaptation to arsenic-rich environments

scientific article
Long-term genetic stability and a high-altitude East Asian origin for the peoples of the high valleys of the Himalayan arc

scientific article published on 20 June 2016
Deep divergences of human gene trees and models of human origins.

scientific article
Haplotype variation and genotype imputation in African populations.

scientific article published on December 2011
Inferring population size changes with sequence and SNP data: lessons from human bottlenecks

scientific article
Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation

scientific article published on 9 January 2018
Ancient X chromosomes reveal contrasting sex bias in Neolithic and Bronze Age Eurasian migrations

scientific article published on 21 February 2017
Sequence determinants of human microsatellite variability.

scientific article
Estimation of Population Divergence Times from Non-Overlapping Genomic Sequences: Examples from Dogs and Wolves

scientific article published on December 21, 2010
Estimating genetic kin relationships in prehistoric populations

scientific article published on 23 April 2018
Using population mixtures to optimize the utility of genomic databases: linkage disequilibrium and association study design in India

scientific article published on 30 May 2007
High frequency of lactose intolerance in a prehistoric hunter-gatherer population in northern Europe

scientific article
Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation

scientific article
Haplotypic background of a private allele at high frequency in the Americas.

scientific article published on 12 February 2009
Ancient mitochondrial DNA from the northern fringe of the Neolithic farming expansion in Europe sheds light on the dispersion process

scientific article
Microsatellite genotyping reveals end-Pleistocene decline in mammoth autosomal genetic variation

scientific article
Investigating population history using temporal genetic differentiation

scientific article
Anisotropic isolation by distance: the main orientations of human genetic differentiation.

scientific article published on 20 November 2012

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