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List of works by Jennifer R Wortman

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Structure, function and diversity of the healthy human microbiome

scientific article
The genome sequence of Drosophila melanogaster

scientific article
The Gene Ontology (GO) database and informatics resource

scientific article (publication date: 2004)
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement

scientific article
The Genome Sequence of the Malaria Mosquito Anopheles gambiae

scientific article
A framework for human microbiome research

scientific article
The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease

scientific article
Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

scientific article
Genome sequence of Aedes aegypti, a major arbovirus vector

scientific article
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

scientific article
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

scientific article
The genome of the blood fluke Schistosoma mansoni

scientific article
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

scientific article (publication date: 11 January 2008)
The TIGR Rice Genome Annotation Resource: improvements and new features

scientific article published on December 2006
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

scientific article (publication date: October 2003)
Comparative genomics of the neglected human malaria parasite Plasmodium vivax

scientific article
Genome sequencing and analysis of Aspergillus oryzae

scientific article
Draft genome of the filarial nematode parasite Brugia malayi

scientific article
The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans

scientific article
Comparative genomics of trypanosomatid parasitic protozoa

scientific article (publication date: 15 July 2005)
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis

scientific article
A catalog of reference genomes from the human microbiome

scientific article
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote

scientific article
Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics

scientific article
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus

scientific article
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article
Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy

article
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

scientific article
A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome

scientific article
Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa

scientific article published on 19 October 2007
DAGchainer: a tool for mining segmental genome duplications and synteny

scientific article published on 9 July 2004
Draft genome sequence of the oilseed species Ricinus communis

scientific article
Genome Sequence of Theileria parva, a Bovine Pathogen That Transforms Lymphocytes

scientific article
Genomic insights into the Ixodes scapularis tick vector of Lyme disease

scientific article published on 9 February 2016
Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA

scientific article
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.

scientific article published on 6 February 2012
Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives

scientific article
The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations

scientific article
Comparative genomics of enterococci: variation in Enterococcus faecalis, clade structure in E. faecium, and defining characteristics of E. gallinarum and E. casseliflavus

scientific article
Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains

scientific article published on 20 August 2013
Identification and characterization of a p53 homologue in Drosophila melanogaster

scientific article
Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal

scientific article (publication date: September 2015)
The institute for genomic research Osa1 rice genome annotation database

scientific article published on May 2005
The IGS Standard Operating Procedure for Automated Prokaryotic Annotation

scientific article
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

scientific article
Genomics of Loa loa, a Wolbachia-free filarial parasite of humans

scientific article
The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

scientific article published on 12 November 2011
The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences

scientific article
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release

scientific article
The ergosterol biosynthesis pathway, transporter genes, and azole resistance in Aspergillus fumigatus.

scientific article

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