List of works - Tom Heskes

MAGMA: generalized gene-set analysis of GWAS data

scientific article

The statistical properties of gene-set analysis

scientific article published on 12 April 2016

Location Sensitive Deep Convolutional Neural Networks for Segmentation of White Matter Hyperintensities

scientific article published on 11 July 2017

Covert attention allows for continuous control of brain-computer interfaces

scientific article published in April 2010

Linear reconstruction of perceived images from human brain activity

scientific article published on 22 July 2013

RankProd 2.0: a refactored Bioconductor package for detecting differentially expressed features in molecular profiling datasets

scientific article published on 8 May 2017

The exact probability distribution of the rank product statistics for replicated experiments

scientific article

Cognitive behavioural therapy with optional graded exercise therapy in patients with severe fatigue with myotonic dystrophy type 1: a multicentre, single-blind, randomised trial

article

A fast algorithm for determining bounds and accurate approximate p-values of the rank product statistic for replicate experiments

scientific article

Selecting features for BCI control based on a covert spatial attention paradigm

scientific article published on 23 June 2009

Deep multi-scale location-aware 3D convolutional neural networks for automated detection of lacunes of presumed vascular origin

scientific article published on 4 February 2017

Gene regulation in the intraerythrocytic cycle of Plasmodium falciparum

scientific article

Structurally-informed Bayesian functional connectivity analysis

scientific article published on 10 October 2013

A Causal and Mediation Analysis of the Comorbidity Between Attention Deficit Hyperactivity Disorder (ADHD) and Autism Spectrum Disorder (ASD).

scientific article

Neural decoding with hierarchical generative models

scientific article published on 21 September 2010

Automated detection of white matter hyperintensities of all sizes in cerebral small vessel disease

scientific article published in December 2016

Efficient Bayesian multivariate fMRI analysis using a sparsifying spatio-temporal prior

scientific article published in December 2009

Bayesian inference of structural brain networks

scientific article published on 4 October 2012

Interpreting single trial data using groupwise regularisation

scientific article

Composite survival index to compare virulence changes in azole-resistant Aspergillus fumigatus clinical isolates

scientific article

Additive Dose Response Models: Explicit Formulation and the Loewe Additivity Consistency Condition

scientific article published on 6 February 2018

Empirical Bayesian random censoring threshold model improves detection of differentially abundant proteins

scientific article published on 22 August 2014

Probabilistic clustering of the human connectome identifies communities and hubs

scientific article published on 30 January 2015

Causal discovery in an adult ADHD data set suggests indirect link between DAT1 genetic variants and striatal brain activation during reward processing

scientific article

Lateralized responses during covert attention are modulated by target eccentricity

scientific article published on 05 January 2011

Conditional and interaction gene-set analysis reveals novel functional pathways for blood pressure

scientific article published in Nature Communications

Molecular machines in the synapse: overlapping protein sets control distinct steps in neurosecretion

scientific article

Bayesian sparse partial least squares

scientific article published on 18 September 2013

Quantifying uncertainty in brain network measures using Bayesian connectomics

scientific article

On the decoding of intracranial data using sparse orthonormalized partial least squares

scientific article

A comparative study of cell classifiers for image-based high-throughput screening

scientific article

BCM: toolkit for Bayesian analysis of Computational Models using samplers

scientific article

Statistical Evidence Suggests that Inattention Drives Hyperactivity/Impulsivity in Attention Deficit-Hyperactivity Disorder

scientific article

Clustering ensembles of neural network models

scientific article

Gaussian mixture models and semantic gating improve reconstructions from human brain activity

scientific article published on January 30, 2015

Bias/Variance Decompositions for Likelihood-Based Estimators

scientific article published on July 28, 1998

Haplotype inference in general pedigrees using the cluster variation method

scientific article published on 29 July 2007

Bayesian Estimation of Conditional Independence Graphs Improves Functional Connectivity Estimates

scientific article published on 5 November 2015

Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies

scientific article published on 18 June 2019

Dynamic decoding of ongoing perception

scientific article published on 13 May 2011

Task-Dependent Learning of Attention

scientific article (publication date: August 1997)

Improving Cox survival analysis with a neural-Bayesian approach

scientific article published in October 2004

Predicting carcinoid heart disease with the noisy-threshold classifier

scientific article

A Bayesian Framework for Combining Protein and Network Topology Information for Predicting Protein-Protein Interactions

scientific article

A direct comparison of visual discrimination of shape and size on a large range of aspect ratios

scientific article published on 11 August 2013

Handling hybrid and missing data in constraint-based causal discovery to study the etiology of ADHD.

scientific article published on 2 December 2016

Bayesian data integration for quantifying the contribution of diverse measurements to parameter estimates

scientific article published on 24 October 2017

Inferring the direction of a causal link and estimating its effect via a Bayesian Mendelian randomization approach

scientific article published on 30 May 2019

Approximate Expectation Maximization

scientific article published in January 2004

List of works by Tom Heskes

MAGMA: generalized gene-set analysis of GWAS data

The statistical properties of gene-set analysis

Location Sensitive Deep Convolutional Neural Networks for Segmentation of White Matter Hyperintensities

Covert attention allows for continuous control of brain-computer interfaces

Linear reconstruction of perceived images from human brain activity

RankProd 2.0: a refactored Bioconductor package for detecting differentially expressed features in molecular profiling datasets

The exact probability distribution of the rank product statistics for replicated experiments

Cognitive behavioural therapy with optional graded exercise therapy in patients with severe fatigue with myotonic dystrophy type 1: a multicentre, single-blind, randomised trial

A fast algorithm for determining bounds and accurate approximate p-values of the rank product statistic for replicate experiments

Selecting features for BCI control based on a covert spatial attention paradigm

Deep multi-scale location-aware 3D convolutional neural networks for automated detection of lacunes of presumed vascular origin

Gene regulation in the intraerythrocytic cycle of Plasmodium falciparum

Structurally-informed Bayesian functional connectivity analysis

A Causal and Mediation Analysis of the Comorbidity Between Attention Deficit Hyperactivity Disorder (ADHD) and Autism Spectrum Disorder (ASD).

Neural decoding with hierarchical generative models

Automated detection of white matter hyperintensities of all sizes in cerebral small vessel disease

Efficient Bayesian multivariate fMRI analysis using a sparsifying spatio-temporal prior

Bayesian inference of structural brain networks

Interpreting single trial data using groupwise regularisation

Composite survival index to compare virulence changes in azole-resistant Aspergillus fumigatus clinical isolates

Additive Dose Response Models: Explicit Formulation and the Loewe Additivity Consistency Condition

Empirical Bayesian random censoring threshold model improves detection of differentially abundant proteins

Probabilistic clustering of the human connectome identifies communities and hubs

Causal discovery in an adult ADHD data set suggests indirect link between DAT1 genetic variants and striatal brain activation during reward processing

Lateralized responses during covert attention are modulated by target eccentricity

Conditional and interaction gene-set analysis reveals novel functional pathways for blood pressure

Molecular machines in the synapse: overlapping protein sets control distinct steps in neurosecretion

Bayesian sparse partial least squares

Quantifying uncertainty in brain network measures using Bayesian connectomics

On the decoding of intracranial data using sparse orthonormalized partial least squares

A comparative study of cell classifiers for image-based high-throughput screening

BCM: toolkit for Bayesian analysis of Computational Models using samplers

Statistical Evidence Suggests that Inattention Drives Hyperactivity/Impulsivity in Attention Deficit-Hyperactivity Disorder

Clustering ensembles of neural network models

Gaussian mixture models and semantic gating improve reconstructions from human brain activity

Bias/Variance Decompositions for Likelihood-Based Estimators

Haplotype inference in general pedigrees using the cluster variation method

Bayesian Estimation of Conditional Independence Graphs Improves Functional Connectivity Estimates

Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies

Dynamic decoding of ongoing perception

Task-Dependent Learning of Attention

Improving Cox survival analysis with a neural-Bayesian approach

Predicting carcinoid heart disease with the noisy-threshold classifier

A Bayesian Framework for Combining Protein and Network Topology Information for Predicting Protein-Protein Interactions

A direct comparison of visual discrimination of shape and size on a large range of aspect ratios

Handling hybrid and missing data in constraint-based causal discovery to study the etiology of ADHD.

Bayesian data integration for quantifying the contribution of diverse measurements to parameter estimates

Inferring the direction of a causal link and estimating its effect via a Bayesian Mendelian randomization approach

Approximate Expectation Maximization

Causal discovery in multiple models from different experiments