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List of works by Henning Hermjakob

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Initial sequencing and analysis of the human genome

scientific article published on 15 February 2001
2016 update of the PRIDE database and its related tools

scientific article
ProteomeXchange provides globally coordinated proteomics data submission and dissemination

scientific article (publication date: March 2014)
The Reactome pathway knowledgebase

scientific article from 2014
The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013

scientific article (publication date: 2013)
The Reactome pathway Knowledgebase

scientific article published on 9 December 2015
Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL

scientific article published in January 1998
The minimum information about a genome sequence (MIGS) specification

scientific article
Reactome: a database of reactions, pathways and biological processes

scientific article
On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database

scientific journal article
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases

scientific article (publication date: 2014)
Reactome knowledgebase of human biological pathways and processes

scientific article (publication date: 2009)
The IntAct molecular interaction database in 2012

scientific article
The InterPro database, an integrated documentation resource for protein families, domains and functional sites

scientific article (publication date: 2001)
The Reactome Pathway Knowledgebase.

scientific article published on 14 November 2017
The IntAct molecular interaction database in 2010

scientific article (publication date: 2010)
IntAct--open source resource for molecular interaction data

scientific article (publication date: 2007)
IntAct: an open source molecular interaction database

scientific article
A common open representation of mass spectrometry data and its application to proteomics research

scientific article
Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database

scientific article published in August 2005
The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

scientific article (publication date: February 2004)
2016 update of the PRIDE database and its related tools.

scientific article published on 28 September 2016
Toward interoperable bioscience data

scientific article (publication date: 27 January 2012)
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

scientific article (publication date: August 2008)
Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia

scientific article
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

scientific article
mzML--a community standard for mass spectrometry data

2011 scientific article
PRIDE: the proteomics identifications database

scientific article
Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

scientific article
Annotating cancer variants and anti-cancer therapeutics in reactome

scientific article
The Proteomics Identifications database: 2010 update

scientific article (publication date: 2010)
Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions

scientific article
InterPro--an integrated documentation resource for protein families, domains and functional sites

scientific article (publication date: December 2000)
PSICQUIC and PSISCORE: accessing and scoring molecular interactions

scientific article (publication date: 29 June 2011)
A guide to the Proteomics Identifications Database proteomics data repository

scientific article (publication date: September 2009)
BioModels: ten-year anniversary

scientific article
The implications of alternative splicing in the ENCODE protein complement

scientific article (publication date: 27 March 2007)
Clinical proteomics: A need to define the field and to begin to set adequate standards

scientific article published on 22 January 2007
The minimum information required for reporting a molecular interaction experiment (MIMIx).

scientific article published on August 2007
PRIDE: a public repository of protein and peptide identifications for the proteomics community

scientific article published in January 2006
The mzIdentML data standard for mass spectrometry-based proteomics results

scientific article (publication date: July 2012)
ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome

article
InterPro: an integrated documentation resource for protein families, domains and functional sites

scientific article
Open Targets: a platform for therapeutic target identification and validation

scientific article
The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries

scientific article published on 28 February 2006
Path2Models: large-scale generation of computational models from biochemical pathway maps

scientific article
Discovering and linking public omics data sets using the Omics Discovery Index.

scientific article
Calling on a million minds for community annotation in WikiProteins

scientific article
PRIDE Inspector: a tool to visualize and validate MS proteomics data

scientific article (publication date: 8 February 2012)
Making proteomics data accessible and reusable: current state of proteomics databases and repositories

scientific article

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