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List of works by Laxmi Parida

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Human Skin, Oral, and Gut Microbiomes Predict Chronological Age

scientific article published on 11 February 2020
Author Correction: Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers

scientific article published on 01 December 2019
The web server of IBM's Bioinformatics and Pattern Discovery group

scientific article
Ultrametric networks: a new tool for phylogenetic analysis

scientific article published on March 5, 2013
Nonredundant Representation of Ancestral Recombinations Graphs

scientific article published on 01 January 2012
Sum of parts is greater than the whole: inference of common genetic history of populations

scientific article
PROTERAN: animated terrain evolution for visual analysis of patterns in protein folding trajectory

scientific article published on 24 October 2006
Permutation pattern discovery in biosequences

scientific article published in January 2004
SimBA: simulation algorithm to fit extant-population distributions

scientific article published on 14 March 2015
MUSE: A MULTI-LOCUS SAMPLING-BASED EPISTASIS ALGORITHM FOR QUANTITATIVE GENETIC TRAIT PREDICTION.

scientific article published on January 2016
Correction to: Sequencing and curation strategies for identifying candidate glioblastoma treatments

scientific article published on 02 August 2019
Linear time algorithms to construct populations fitting multiple constraint distributions at genomic scales

scientific article
Correction: Population Differentiation of Southern Indian Male Lineages Correlates with Agricultural Expansions Predating the Caste System.

scientific article published on 26 July 2013
Transcriptome characterization and differentially expressed genes under flooding and drought stress in the biomass grasses Phalaris arundinacea and Dactylis glomerata

scientific article published on 01 October 2019
Functional pathways in respiratory tract microbiome separate COVID-19 from community-acquired pneumonia patients

scientific article published on 03 May 2020
Sampling ARG of multiple populations under complex configurations of subdivision and admixture

scientific article published on 7 December 2015
The lipogenic regulator SREBF2 induces Transferrin in circulating melanoma cells and suppresses ferroptosis

scientific article published on 17 November 2020
Effect of sampling on the extent and accuracy of the inferred genetic history of recombining genome.

scientific article published on 23 January 2014
APBC 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore, India, 18-21 January 2010.

scientific article
Proceedings of The Twelfth Annual RECOMB Comparative Genomics Conference

scientific article published on 17 October 2014
Food authentication from shotgun sequencing reads with an application on high protein powders

scientific article published on 19 November 2019
Discovering patterns in gene order.

scientific article published on January 2012
Correction: Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

scientific article
IPED2: Inheritance Path based Pedigree Reconstruction Algorithm for Complicated Pedigrees

scientific article
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data

scientific article published on 29 April 2021
Signal enrichment with strain-level resolution in metagenomes using topological data analysis

scientific article published on 04 April 2019
Correction: Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

scientific article (publication date: 5 October 2011)
Haplotype assembly of autotetraploid potato using integer linear programing

scientific article published on 01 September 2019
Explainable AI reveals changes in skin microbiome composition linked to phenotypic differences

A Combinatorial Approach to Automatic Discovery of Cluster-Patterns

Longitudinal Single-Cell Dynamics of Chromatin Accessibility and Mitochondrial Mutations in Chronic Lymphocytic Leukemia Mirror Disease History

scientific article published on 01 December 2021
Lies, Gosh Darn Lies, and Not Enough Good Statistics: Why Epidemic Model Parameter Estimation Fails

scientific article published on 22 April 2020
Bacterial modification of the host glycosaminoglycan heparan sulfate modulates SARS-CoV-2 infectivity

scientific article published on 18 August 2020
Hierarchically Labeled Database Indexing Allows Scalable Characterization of Microbiomes

scientific article published on 17 March 2020
Statistical significance of large gene clusters

scientific article published in November 2007
Haplotype assembly of autotetraploid potato using integer linear programing

scientific article published on 01 November 2019
Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis.

scientific article published on 11 January 2016
Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment

scientific article published on 22 November 2020
Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

scientific article published on 28 November 2022
Dark-matter matters: Discriminating subtle blood cancers using the darkest DNA

scientific article published on 30 August 2019

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